Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-1086P-201ENST00000410930 100 ntBASIC2.28□□□□□ -2.04
TRIM56Q9BRZ2 Z98742.3-201ENST00000418637 326 ntBASIC2.28□□□□□ -2.04
TRIM56Q9BRZ2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.28□□□□□ -2.04
TRIM56Q9BRZ2 SNORD38B-202ENST00000625943 69 ntBASIC2.28□□□□□ -2.04
TRIM56Q9BRZ2 RNA5SP48-201ENST00000363969 126 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-865P-201ENST00000364772 107 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 MIR17-201ENST00000385012 84 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-447P-201ENST00000410293 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNA5SP425-201ENST00000410336 112 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-1118P-201ENST00000410382 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-1076P-201ENST00000410397 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-355P-201ENST00000410427 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-791P-201ENST00000410467 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-705P-201ENST00000410601 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-1100P-201ENST00000410691 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-860P-201ENST00000410860 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-1217P-201ENST00000411276 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-785P-201ENST00000411324 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 BTF3P4-201ENST00000418852 495 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 AC090844.1-201ENST00000422019 156 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 AL356320.1-201ENST00000429616 163 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RPS29P28-201ENST00000446439 141 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 RNU7-79P-201ENST00000516082 62 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 SNORA44.1-201ENST00000517031 108 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 MIR5007-201ENST00000583098 95 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 U6.90-201ENST00000614007 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 U6.70-201ENST00000620287 104 ntBASIC2.27□□□□□ -2.05
TRIM56Q9BRZ2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 SNORD114-10-201ENST00000363409 72 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 SNORD116-10-201ENST00000363791 102 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 RNA5SP259-201ENST00000365541 109 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 Y_RNA.467-201ENST00000384297 102 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-813P-201ENST00000384691 107 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 RNA5SP233-201ENST00000459153 113 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 snoU13.15-201ENST00000459407 104 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 AC104435.1-201ENST00000483483 166 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 SNORD111.1-201ENST00000516421 86 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 RNA5SP82-201ENST00000516707 92 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 AC015688.6-201ENST00000577737 104 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 MIR4299-201ENST00000577899 72 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 MIR548AO-201ENST00000579992 96 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 MIR376B-201ENST00000614515 100 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 IGLL4P-201ENST00000614590 133 ntBASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM56Q9BRZ2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 RNY1P1-201ENST00000364372 112 ntBASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 RN7SKP223-201ENST00000410582 62 ntBASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 AL445685.2-201ENST00000422551 342 ntBASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 SNORD67.1-201ENST00000516618 108 ntBASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 SNORA77B-201ENST00000578179 125 ntBASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 MIR1245B-201ENST00000636115 69 ntBASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM56Q9BRZ2 RNY1P10-201ENST00000363268 113 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 Y_RNA.140-201ENST00000363474 103 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 Y_RNA.219-201ENST00000364232 113 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 Y_RNA.448-201ENST00000384185 108 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 SNORD116-22-201ENST00000384430 92 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 SNORD38.2-201ENST00000384470 69 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 RNA5SP237-201ENST00000410414 113 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 AC109327.2-201ENST00000448339 378 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 UBL5P1-201ENST00000507979 193 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-250P-201ENST00000516958 103 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-1006P-201ENST00000516998 103 ntBASIC2.24□□□□□ -2.05
TRIM56Q9BRZ2 U8.15-201ENST00000390947 134 ntBASIC2.23□□□□□ -2.05
TRIM56Q9BRZ2 RPL31P63-201ENST00000422565 375 ntBASIC2.23□□□□□ -2.05
TRIM56Q9BRZ2 RNU7-41P-201ENST00000515917 61 ntBASIC2.23□□□□□ -2.05
TRIM56Q9BRZ2 RNU7-137P-201ENST00000516788 62 ntBASIC2.23□□□□□ -2.05
TRIM56Q9BRZ2 MIR1273D-201ENST00000577266 86 ntBASIC2.23□□□□□ -2.05
TRIM56Q9BRZ2 MIR4648-201ENST00000580107 72 ntBASIC2.23□□□□□ -2.05
TRIM56Q9BRZ2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.23□□□□□ -2.05
TRIM56Q9BRZ2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-573P-201ENST00000383938 106 ntBASIC2.22□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-439P-201ENST00000384188 106 ntBASIC2.22□□□□□ -2.05
TRIM56Q9BRZ2 MIR34C-201ENST00000384831 77 ntBASIC2.22□□□□□ -2.05
TRIM56Q9BRZ2 RNU6-592P-201ENST00000411333 103 ntBASIC2.22□□□□□ -2.05
TRIM56Q9BRZ2 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
TRIM56Q9BRZ2 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
TRIM56Q9BRZ2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.22□□□□□ -2.05
TRIM56Q9BRZ2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRIM56Q9BRZ2 WWP1P1-201ENST00000466609 2769 ntBASIC2.21□□□□□ -2.05
TRIM56Q9BRZ2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 SNORD33-201ENST00000362761 85 ntBASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 Y_RNA.98-201ENST00000363109 102 ntBASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 Y_RNA.247-201ENST00000364500 92 ntBASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-242P-201ENST00000384359 107 ntBASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 RNU7-48P-201ENST00000458875 63 ntBASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 Y_RNA.685-201ENST00000516532 108 ntBASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
TRIM56Q9BRZ2 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 SNORD58A-201ENST00000383875 65 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-675P-201ENST00000384236 104 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 MIR30A-201ENST00000385092 71 ntBASIC2.2□□□□□ -2.06
TRIM56Q9BRZ2 RNU6-1321P-201ENST00000390905 107 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms