Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1□□□□□ -2.57
LINC00052Q96N35 RNU6-893P-201ENST00000458841 100 ntBASIC-1□□□□□ -2.57
LINC00052Q96N35 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1□□□□□ -2.57
LINC00052Q96N35 RNU6-1299P-201ENST00000516316 100 ntBASIC-1□□□□□ -2.57
LINC00052Q96N35 RNU7-137P-201ENST00000516788 62 ntBASIC-1□□□□□ -2.57
LINC00052Q96N35 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1□□□□□ -2.57
LINC00052Q96N35 MTND5P40-201ENST00000559945 246 ntBASIC-1□□□□□ -2.57
LINC00052Q96N35 Y_RNA.757-201ENST00000578934 114 ntBASIC-1□□□□□ -2.57
LINC00052Q96N35 RNY4P14-201ENST00000363656 96 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 RNU6-484P-201ENST00000384016 107 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 RNU6-154P-201ENST00000384306 106 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 MTND3P8-201ENST00000412909 339 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.01□□□□□ -2.57
LINC00052Q96N35 MIR548AE1-201ENST00000583292 70 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 VN1R91P-201ENST00000594377 169 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.01□□□□□ -2.57
LINC00052Q96N35 SNORD83B-201ENST00000386745 93 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 SNORA53-201ENST00000391141 249 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 MTND1P34-201ENST00000438556 671 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 AC093423.1-201ENST00000440817 142 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 SEPT14P8-201ENST00000508026 178 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 MRPS35P2-201ENST00000508242 191 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 RNU6-138P-201ENST00000515952 107 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 RNU6-506P-201ENST00000516553 94 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 SNORD38.3-201ENST00000516599 73 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 AC024909.2-201ENST00000553035 286 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 C8orf59P2-201ENST00000603441 271 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 MIR6851-201ENST00000617060 67 ntBASIC-1.02□□□□□ -2.57
LINC00052Q96N35 RNU4-36P-201ENST00000364294 144 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 RNU4-16P-201ENST00000364737 141 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 RNU6-890P-201ENST00000384121 107 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 RNU6-310P-201ENST00000384655 107 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 MIR526A2-201ENST00000390198 65 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 RNU2-55P-201ENST00000411146 174 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 SNORA13-201ENST00000458790 133 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 RNA5SP153-201ENST00000516498 76 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 SNORD67.1-201ENST00000516618 108 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 RNU7-70P-201ENST00000516941 66 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 AC040926.1-201ENST00000530195 238 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 AP000676.1-201ENST00000533307 52 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 MIR3129-201ENST00000581095 76 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 AC097639.2-201ENST00000603159 172 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 RNU6-86P-201ENST00000606534 107 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 SNORD113-5-201ENST00000607261 78 ntBASIC-1.03□□□□□ -2.57
LINC00052Q96N35 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 MIR519E-201ENST00000385075 84 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 RNU4-14P-201ENST00000410858 122 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 AL359881.1-201ENST00000602916 267 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 AL121655.1-201ENST00000605811 308 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 AC007485.1-201ENST00000616755 206 ntBASIC-1.04□□□□□ -2.58
LINC00052Q96N35 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 SNORD114-10-201ENST00000363409 72 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 RNU4-10P-201ENST00000364383 140 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 PMCHL1-202ENST00000423102 261 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 SPINT5P-201ENST00000448174 155 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 MIR5688-201ENST00000580619 83 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 MIR548AG2-201ENST00000581228 64 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 AC048344.4-201ENST00000619744 527 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 MIR3974-201ENST00000637126 96 ntBASIC-1.05□□□□□ -2.58
LINC00052Q96N35 SNORA32-201ENST00000384072 121 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 MIR181A1-201ENST00000385026 110 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 MIR519A1-201ENST00000385257 85 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 RNU2-16P-201ENST00000410712 136 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 RNA5SP25-201ENST00000410815 110 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.06□□□□□ -2.58
LINC00052Q96N35 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.06□□□□□ -2.58
LINC00052Q96N35 AC099799.1-201ENST00000439809 192 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.06□□□□□ -2.58
LINC00052Q96N35 RNU6-507P-201ENST00000516045 100 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 SCARNA17-201ENST00000516183 144 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 SNORA27.4-201ENST00000516650 95 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 IGKV1-22-201ENST00000524313 326 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 AC133104.2-201ENST00000615272 193 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 AC078883.4-201ENST00000623218 367 ntBASIC-1.06□□□□□ -2.58
LINC00052Q96N35 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.07□□□□□ -2.58
LINC00052Q96N35 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms