Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR30D-201ENST00000362283 70 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.8-201ENST00000362353 102 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.584-201ENST00000391090 114 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 MIR548I1-201ENST00000408810 149 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 U7.7-201ENST00000459276 60 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-1212P-201ENST00000517023 104 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 AC010332.2-201ENST00000613083 1904 ntBASIC1.14□□□□□ -2.23
PPP4R4Q6NUP7 SNORA22-201ENST00000383907 134 ntBASIC1.13□□□□□ -2.23
PPP4R4Q6NUP7 SNORA22C-201ENST00000384614 134 ntBASIC1.13□□□□□ -2.23
PPP4R4Q6NUP7 MIR518E-201ENST00000385252 88 ntBASIC1.13□□□□□ -2.23
PPP4R4Q6NUP7 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
PPP4R4Q6NUP7 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-994P-201ENST00000410507 111 ntBASIC1.13□□□□□ -2.23
PPP4R4Q6NUP7 RNA5SP144-201ENST00000410846 116 ntBASIC1.13□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.120-201ENST00000363304 110 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-309P-201ENST00000364573 106 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.464-201ENST00000384282 110 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 SNORA20-201ENST00000384662 132 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-460P-201ENST00000391158 108 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 MIR3152-201ENST00000579801 74 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 MIR6504-201ENST00000613520 61 ntBASIC1.12□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.170-201ENST00000363746 110 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.171-201ENST00000363760 102 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-934P-201ENST00000365154 107 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 MT-TR-201ENST00000387439 65 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-255P-201ENST00000516957 105 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 AC020891.4-201ENST00000605745 93 ntBASIC1.11□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 MIR608-201ENST00000384820 100 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 SNORD89-201ENST00000390981 114 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 AL603914.1-201ENST00000401964 204 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 RPS26P5-201ENST00000418544 335 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 AC067940.1-201ENST00000458411 300 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-240P-201ENST00000516098 97 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 ACA64.5-201ENST00000516207 127 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 AC011603.4-201ENST00000611325 277 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PPP4R4Q6NUP7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.400-201ENST00000383963 111 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 RNU6-342P-201ENST00000384521 104 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 MIR569-201ENST00000385228 96 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 MTATP6P21-201ENST00000440681 189 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 RNU2-35P-201ENST00000516446 142 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.690-201ENST00000516603 95 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 MIR4771-2-201ENST00000577758 74 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 AC025627.3-201ENST00000582078 182 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 MIR4771-1-201ENST00000582617 74 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 AL662814.1-201ENST00000617364 121 ntBASIC1.09□□□□□ -2.23
PPP4R4Q6NUP7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 Y_RNA.215-201ENST00000364204 112 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 RNU6-690P-201ENST00000365242 106 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 MIR1276-201ENST00000408707 83 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 MIR18B-201ENST00000454574 71 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 SNORA25.12-201ENST00000516202 82 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 AC108081.1-201ENST00000604358 221 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 AL136317.1-201ENST00000612653 226 ntBASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
PPP4R4Q6NUP7 Y_RNA.470-201ENST00000384307 117 ntBASIC1.07□□□□□ -2.24
PPP4R4Q6NUP7 AC113410.1-201ENST00000505029 247 ntBASIC1.07□□□□□ -2.24
PPP4R4Q6NUP7 RNU7-200P-201ENST00000516105 62 ntBASIC1.07□□□□□ -2.24
PPP4R4Q6NUP7 MIR548X2-201ENST00000579776 100 ntBASIC1.07□□□□□ -2.24
PPP4R4Q6NUP7 AL353765.1-201ENST00000605514 183 ntBASIC1.07□□□□□ -2.24
PPP4R4Q6NUP7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.07□□□□□ -2.24
PPP4R4Q6NUP7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 MIR605-201ENST00000385078 83 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 MT-TF-201ENST00000387314 71 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 AL512326.2-201ENST00000426359 151 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 snoU13.18-201ENST00000459483 104 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 RPL39P28-201ENST00000465655 155 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 AC141846.1-201ENST00000568348 142 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 MIR4676-201ENST00000583078 72 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 MIR4305-201ENST00000583252 102 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 RMST_2.1-201ENST00000617263 136 ntBASIC1.06□□□□□ -2.24
PPP4R4Q6NUP7 MIR1-1-201ENST00000362147 71 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 RNU6-915P-201ENST00000364943 103 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 SNORA18-201ENST00000384416 132 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 Y_RNA.506-201ENST00000384494 102 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 RNU6-1237P-201ENST00000384777 107 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 MIR100-201ENST00000385259 80 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 AC096949.1-201ENST00000412047 152 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 RNU6-113P-201ENST00000516653 101 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 RNA5SP102-201ENST00000516865 106 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 MIR4804-201ENST00000581683 73 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
PPP4R4Q6NUP7 AL078603.1-201ENST00000603824 313 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms