Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 Y_RNA.344-201ENST00000365381 112 ntBASIC1.82□□□□□ -2.12
KRT40Q6A162 Y_RNA.374-201ENST00000365606 101 ntBASIC1.82□□□□□ -2.12
KRT40Q6A162 SNORD12C-201ENST00000386307 89 ntBASIC1.82□□□□□ -2.12
KRT40Q6A162 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRT40Q6A162 RNU7-41P-201ENST00000515917 61 ntBASIC1.82□□□□□ -2.12
KRT40Q6A162 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.82□□□□□ -2.12
KRT40Q6A162 MIR4679-2-201ENST00000578358 77 ntBASIC1.82□□□□□ -2.12
KRT40Q6A162 uc_338.28-201ENST00000612082 187 ntBASIC1.82□□□□□ -2.12
KRT40Q6A162 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.82□□□□□ -2.12
KRT40Q6A162 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRT40Q6A162 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRT40Q6A162 RNU6-1107P-201ENST00000364817 104 ntBASIC1.81□□□□□ -2.12
KRT40Q6A162 SNORD114-22-201ENST00000365423 72 ntBASIC1.81□□□□□ -2.12
KRT40Q6A162 Y_RNA.470-201ENST00000384307 117 ntBASIC1.81□□□□□ -2.12
KRT40Q6A162 RNU6-106P-201ENST00000384405 107 ntBASIC1.81□□□□□ -2.12
KRT40Q6A162 SNORA51.10-201ENST00000384418 136 ntBASIC1.81□□□□□ -2.12
KRT40Q6A162 MIR1270-201ENST00000459320 83 ntBASIC1.81□□□□□ -2.12
KRT40Q6A162 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.81□□□□□ -2.12
KRT40Q6A162 MIR8055-201ENST00000610739 97 ntBASIC1.81□□□□□ -2.12
KRT40Q6A162 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
KRT40Q6A162 SNORA22.1-201ENST00000362701 134 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 Y_RNA.531-201ENST00000384589 121 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 MIR520C-201ENST00000385005 87 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 AL022718.1-201ENST00000412004 84 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 RPS23P4-201ENST00000487908 423 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 RNU6-922P-201ENST00000516753 99 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 MIR3613-201ENST00000579844 87 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 AC087741.2-201ENST00000619415 172 ntBASIC1.8□□□□□ -2.12
KRT40Q6A162 MIR302D-201ENST00000362275 68 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 SNORA63.5-201ENST00000363548 123 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 RNY4P6-201ENST00000363667 96 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 Y_RNA.430-201ENST00000384081 110 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 MIR548D2-201ENST00000384955 97 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 RNU6-554P-201ENST00000410466 106 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 AC090844.1-201ENST00000422019 156 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 RNU1-123P-201ENST00000458950 160 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 snoU13.16-201ENST00000459350 104 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 MIR548AO-201ENST00000579992 96 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 MIR3192-201ENST00000584920 77 ntBASIC1.79□□□□□ -2.12
KRT40Q6A162 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
KRT40Q6A162 SNORD115-2-201ENST00000362842 82 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 SNORA7.1-201ENST00000363750 139 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 RNU6-60P-201ENST00000364792 103 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 SNORD115-20-201ENST00000365099 82 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 MIR1323-201ENST00000408090 73 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 snoU13.25-201ENST00000458945 104 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 MIR3163-201ENST00000581592 73 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 MIR8074-201ENST00000615081 81 ntBASIC1.78□□□□□ -2.12
KRT40Q6A162 MIR450A1-201ENST00000362262 91 ntBASIC1.77□□□□□ -2.13
KRT40Q6A162 AL451046.2-201ENST00000403074 277 ntBASIC1.77□□□□□ -2.13
KRT40Q6A162 SNORD111.1-201ENST00000516421 86 ntBASIC1.77□□□□□ -2.13
KRT40Q6A162 AL513534.2-201ENST00000603836 250 ntBASIC1.77□□□□□ -2.13
KRT40Q6A162 AL096861.1-201ENST00000610899 123 ntBASIC1.77□□□□□ -2.13
KRT40Q6A162 Z97988.1-201ENST00000637697 135 ntBASIC1.77□□□□□ -2.13
KRT40Q6A162 Y_RNA.323-201ENST00000365157 109 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 RNU6-53P-201ENST00000365367 106 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 RNU7-113P-201ENST00000459273 62 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 AC113410.1-201ENST00000505029 247 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 RNU6-322P-201ENST00000516010 103 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 RNU6-412P-201ENST00000516434 106 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 RNU7-6P-201ENST00000516845 62 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 SNORD53B-201ENST00000577887 78 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 MIR548AE2-201ENST00000583456 67 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 Y_RNA.773-201ENST00000607168 90 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 MIR8065-201ENST00000620577 100 ntBASIC1.76□□□□□ -2.13
KRT40Q6A162 U8.6-201ENST00000364939 135 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 RNU6-1067P-201ENST00000384752 107 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 MIR320A-201ENST00000385302 82 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 RPL39P34-201ENST00000477141 156 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 MIR3152-201ENST00000579801 74 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 RNU6-94P-201ENST00000607728 107 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 AL157834.3-201ENST00000615543 103 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 MIR4251-201ENST00000635819 61 ntBASIC1.75□□□□□ -2.13
KRT40Q6A162 AL589743.1-201ENST00000551932 2712 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 MIR96-201ENST00000362288 78 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 SNORD115-19-201ENST00000363098 82 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 SNORD115-18-201ENST00000363293 82 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 SNORD115-17-201ENST00000364612 82 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 SNORA1.1-201ENST00000364671 133 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 RNU6-1014P-201ENST00000383940 103 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 MIR759-201ENST00000390224 91 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 MIR1304-201ENST00000408243 91 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 MIR1302-7-201ENST00000408841 72 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 RNU6-602P-201ENST00000411155 105 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 MIR1255B1-201ENST00000636325 63 ntBASIC1.74□□□□□ -2.13
KRT40Q6A162 Y_RNA.163-201ENST00000363702 113 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 RNU4-69P-201ENST00000410677 143 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 RPS3AP1-201ENST00000413190 320 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.73□□□□□ -2.13
KRT40Q6A162 RNA5SP33-201ENST00000516687 98 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 AC068339.1-201ENST00000526965 141 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 MIR4421-201ENST00000578133 69 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 MIR5009-201ENST00000578736 100 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 MIR6515-201ENST00000619843 57 ntBASIC1.73□□□□□ -2.13
KRT40Q6A162 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms