Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC104389.3-201ENST00000445629 235 ntBASIC3.03□□□□□ -1.92
CTC1Q2NKJ3 RNU6-75P-201ENST00000515944 104 ntBASIC3.03□□□□□ -1.92
CTC1Q2NKJ3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.03□□□□□ -1.92
CTC1Q2NKJ3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTC1Q2NKJ3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 Y_RNA.36-201ENST00000362602 112 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 RNU6-859P-201ENST00000362728 107 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 RNU6-23P-201ENST00000363283 107 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 RNY1P2-201ENST00000364820 117 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 MIR526A1-201ENST00000384897 85 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 MIR504-201ENST00000385065 83 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 MIR29C-201ENST00000385231 88 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 AC079150.2-201ENST00000443733 78 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 MIR3169-201ENST00000578032 83 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 MIR4769-201ENST00000584126 77 ntBASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
CTC1Q2NKJ3 RNA5SP68-201ENST00000363885 119 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 RNU6-154P-201ENST00000384306 106 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 SNORD45A-201ENST00000384512 84 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 RNU6-1067P-201ENST00000384752 107 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 snoU13.17-201ENST00000458802 104 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 snoU13.26-201ENST00000459452 105 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 RN7SL633P-201ENST00000488974 297 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 AC008413.1-201ENST00000511864 177 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 RNA5SP24-201ENST00000516478 95 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 CYP3A52P-201ENST00000563326 91 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 AC141846.1-201ENST00000568348 142 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 AC069114.2-201ENST00000604699 304 ntBASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
CTC1Q2NKJ3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CTC1Q2NKJ3 Y_RNA.283-201ENST00000364798 112 ntBASIC3□□□□□ -1.93
CTC1Q2NKJ3 MIR548U-201ENST00000390728 81 ntBASIC3□□□□□ -1.93
CTC1Q2NKJ3 MIR942-201ENST00000401111 86 ntBASIC3□□□□□ -1.93
CTC1Q2NKJ3 RNA5SP237-201ENST00000410414 113 ntBASIC3□□□□□ -1.93
CTC1Q2NKJ3 MIR4524B-201ENST00000581569 115 ntBASIC3□□□□□ -1.93
CTC1Q2NKJ3 MIR6817-201ENST00000615588 66 ntBASIC3□□□□□ -1.93
CTC1Q2NKJ3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 RNU6-681P-201ENST00000364012 104 ntBASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 RNU1-112P-201ENST00000364401 164 ntBASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 Y_RNA.371-201ENST00000365591 113 ntBASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 AL138827.1-201ENST00000402666 306 ntBASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 snoU13.15-201ENST00000459407 104 ntBASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 SNORD53-201ENST00000579969 78 ntBASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CTC1Q2NKJ3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 SNORD36A-201ENST00000362874 73 ntBASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 MIR516A2-201ENST00000384888 90 ntBASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 MIR516A1-201ENST00000385033 90 ntBASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 RNA5SP21-201ENST00000410917 96 ntBASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 AC138749.4-201ENST00000563970 127 ntBASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 MIR3126-201ENST00000577443 74 ntBASIC2.98□□□□□ -1.93
CTC1Q2NKJ3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CTC1Q2NKJ3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.97□□□□□ -1.93
CTC1Q2NKJ3 SNORD115-3-201ENST00000363100 82 ntBASIC2.97□□□□□ -1.93
CTC1Q2NKJ3 RNU6-571P-201ENST00000384128 107 ntBASIC2.97□□□□□ -1.93
CTC1Q2NKJ3 SNORD88.1-201ENST00000408684 91 ntBASIC2.97□□□□□ -1.93
CTC1Q2NKJ3 SNORD92-201ENST00000585078 85 ntBASIC2.97□□□□□ -1.93
CTC1Q2NKJ3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.97□□□□□ -1.93
CTC1Q2NKJ3 U6.109-201ENST00000636749 87 ntBASIC2.97□□□□□ -1.93
CTC1Q2NKJ3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CTC1Q2NKJ3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CTC1Q2NKJ3 AC019129.1-201ENST00000403786 261 ntBASIC2.96□□□□□ -1.94
CTC1Q2NKJ3 SNORA3.2-201ENST00000408221 125 ntBASIC2.96□□□□□ -1.94
CTC1Q2NKJ3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CTC1Q2NKJ3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTC1Q2NKJ3 ZNF209P-201ENST00000593450 2304 ntBASIC2.96□□□□□ -1.94
CTC1Q2NKJ3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 RNU1-91P-201ENST00000364746 163 ntBASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 RNU6-291P-201ENST00000384720 107 ntBASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 RNU6-243P-201ENST00000391140 107 ntBASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 RNA5SP148-201ENST00000516527 94 ntBASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 RNU6-881P-201ENST00000516813 102 ntBASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 MIR4511-201ENST00000582784 87 ntBASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 AC005786.1-201ENST00000588553 154 ntBASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTC1Q2NKJ3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 RNU6-466P-201ENST00000391224 103 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 RNU6-1254P-201ENST00000391266 104 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 RNA5SP492-201ENST00000411330 114 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 AC110620.1-201ENST00000416042 228 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 RNU6-977P-201ENST00000516411 103 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 MIR5094-201ENST00000578766 85 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 MIR548AO-201ENST00000579992 96 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 MIR4764-201ENST00000580680 88 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 AL662814.1-201ENST00000617364 121 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 ZNF658B-202ENST00000615961 3375 ntBASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 3066.9 ms