Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR4473-201ENST00000583731 91 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 MIR382-201ENST00000637119 76 ntBASIC-1□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 SNORD81.1-201ENST00000363064 77 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 RNU6-801P-201ENST00000364087 105 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 RNU6-259P-201ENST00000383999 107 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 RNU6-383P-201ENST00000410864 94 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 AP000533.3-201ENST00000447704 118 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 RNU7-169P-201ENST00000459456 61 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 AC022137.1-201ENST00000483735 151 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 SNORD22.1-201ENST00000516331 125 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 RNU7-110P-201ENST00000516891 62 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 RNU7-4P-201ENST00000516961 62 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 RNU6-264P-201ENST00000517134 104 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 AC119751.7-201ENST00000600494 245 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 AC099654.14-201ENST00000638599 341 ntBASIC-1.01□□□□□ -2.57
RFX7Q2KHR2 SNORA22.1-201ENST00000362701 134 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 MIR628-201ENST00000385229 95 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 RNU6-308P-201ENST00000390957 107 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 RNU6-780P-201ENST00000391030 104 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 MIR1285-2-201ENST00000408311 88 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 AC019235.1-201ENST00000503847 207 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 RNU7-79P-201ENST00000516082 62 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 AL021707.8-201ENST00000609428 183 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 TPTEP1-208ENST00000636884 213 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 AC024614.3-201ENST00000637860 256 ntBASIC-1.02□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.03□□□□□ -2.57
RFX7Q2KHR2 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.03□□□□□ -2.57
RFX7Q2KHR2 MIR518B-201ENST00000385127 83 ntBASIC-1.03□□□□□ -2.57
RFX7Q2KHR2 MTND3P10-201ENST00000450967 341 ntBASIC-1.03□□□□□ -2.57
RFX7Q2KHR2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.03□□□□□ -2.57
RFX7Q2KHR2 AC006362.1-201ENST00000567392 174 ntBASIC-1.03□□□□□ -2.57
RFX7Q2KHR2 MIR367-201ENST00000362299 68 ntBASIC-1.04□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.04□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.04□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.04□□□□□ -2.58
RFX7Q2KHR2 MT-TY-201ENST00000387409 66 ntBASIC-1.04□□□□□ -2.58
RFX7Q2KHR2 MIR8485-201ENST00000401372 91 ntBASIC-1.04□□□□□ -2.58
RFX7Q2KHR2 AP003733.2-201ENST00000529409 171 ntBASIC-1.04□□□□□ -2.58
RFX7Q2KHR2 MIR1321-201ENST00000637766 79 ntBASIC-1.04□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 RNU1-141P-201ENST00000364623 158 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 MIR599-201ENST00000385069 95 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 HLA-S-202ENST00000425174 53 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 RPS3AP52-201ENST00000435639 297 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 SNORA13-201ENST00000458790 133 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 RNU6-893P-201ENST00000458841 100 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 RN7SKP299-201ENST00000606679 301 ntBASIC-1.05□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.06□□□□□ -2.58
RFX7Q2KHR2 RNU6-21P-201ENST00000384710 107 ntBASIC-1.06□□□□□ -2.58
RFX7Q2KHR2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
RFX7Q2KHR2 RNU7-13P-201ENST00000516413 62 ntBASIC-1.06□□□□□ -2.58
RFX7Q2KHR2 MIR4724-201ENST00000579485 89 ntBASIC-1.06□□□□□ -2.58
RFX7Q2KHR2 AC091932.4-201ENST00000623386 200 ntBASIC-1.06□□□□□ -2.58
RFX7Q2KHR2 U6.92-201ENST00000636464 89 ntBASIC-1.06□□□□□ -2.58
RFX7Q2KHR2 RNU6-502P-201ENST00000362419 108 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 RNU6-449P-201ENST00000383914 107 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 snoU13.13-201ENST00000458842 104 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 RNU6-175P-201ENST00000516896 107 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 RNU7-70P-201ENST00000516941 66 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 RNU6-158P-201ENST00000517104 100 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 AP000676.1-201ENST00000533307 52 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 MIR4441-201ENST00000582623 100 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 AC069503.3-201ENST00000618674 145 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 MIR6841-201ENST00000637129 72 ntBASIC-1.07□□□□□ -2.58
RFX7Q2KHR2 RNU4-80P-201ENST00000363200 141 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 DEFB108C-201ENST00000400154 252 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 MIR548F5-201ENST00000408421 86 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 AC107399.1-201ENST00000451226 265 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 YWHAEP2-201ENST00000580066 112 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 U2.1-201ENST00000618978 145 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 AC021613.1-201ENST00000623880 111 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 AC090582.1-201ENST00000636321 199 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 RNU6-900P-201ENST00000384498 102 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 MIR147A-201ENST00000385079 72 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 AL603914.1-201ENST00000401964 204 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 RPS29P25-201ENST00000481709 171 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 RNU6-397P-201ENST00000516226 104 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 snoU83B.1-201ENST00000517136 88 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 MIR3920-201ENST00000581751 86 ntBASIC-1.08□□□□□ -2.58
RFX7Q2KHR2 RNY3P11-201ENST00000364153 102 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms