Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.15□□□□□ -2.06
EPHB3P54753 Y_RNA.140-201ENST00000363474 103 ntBASIC2.15□□□□□ -2.07
EPHB3P54753 SNORD58A-201ENST00000383875 65 ntBASIC2.15□□□□□ -2.07
EPHB3P54753 RNU6-296P-201ENST00000384608 107 ntBASIC2.15□□□□□ -2.07
EPHB3P54753 U8.15-201ENST00000390947 134 ntBASIC2.15□□□□□ -2.07
EPHB3P54753 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.15□□□□□ -2.07
EPHB3P54753 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
EPHB3P54753 RNU6-267P-201ENST00000516714 103 ntBASIC2.15□□□□□ -2.07
EPHB3P54753 MIR4668-201ENST00000582284 70 ntBASIC2.15□□□□□ -2.07
EPHB3P54753 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
EPHB3P54753 Y_RNA.247-201ENST00000364500 92 ntBASIC2.14□□□□□ -2.07
EPHB3P54753 SNORA16B-201ENST00000364674 135 ntBASIC2.14□□□□□ -2.07
EPHB3P54753 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
EPHB3P54753 snoU13.16-201ENST00000459350 104 ntBASIC2.14□□□□□ -2.07
EPHB3P54753 UBL5P1-201ENST00000507979 193 ntBASIC2.14□□□□□ -2.07
EPHB3P54753 RNU7-35P-201ENST00000517174 62 ntBASIC2.14□□□□□ -2.07
EPHB3P54753 MIR4709-201ENST00000577272 72 ntBASIC2.14□□□□□ -2.07
EPHB3P54753 MIR8055-201ENST00000610739 97 ntBASIC2.14□□□□□ -2.07
EPHB3P54753 RNU6-112P-201ENST00000363599 104 ntBASIC2.13□□□□□ -2.07
EPHB3P54753 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
EPHB3P54753 AL445685.2-201ENST00000422551 342 ntBASIC2.13□□□□□ -2.07
EPHB3P54753 HMGN1P33-201ENST00000432945 451 ntBASIC2.13□□□□□ -2.07
EPHB3P54753 RNA5SP481-201ENST00000516814 122 ntBASIC2.13□□□□□ -2.07
EPHB3P54753 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
EPHB3P54753 RNU6-548P-201ENST00000517083 115 ntBASIC2.13□□□□□ -2.07
EPHB3P54753 SNORA74.3-201ENST00000517108 154 ntBASIC2.13□□□□□ -2.07
EPHB3P54753 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
EPHB3P54753 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.13□□□□□ -2.07
EPHB3P54753 SNORD38.1-201ENST00000363863 68 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 RNU6-1163P-201ENST00000364516 107 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 SNORA6-201ENST00000384033 151 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 RNU6-1067P-201ENST00000384752 107 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 MIR583-201ENST00000384846 75 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 MIR206-201ENST00000384872 86 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 U8.13-201ENST00000390842 128 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 RNU6-1307P-201ENST00000391012 103 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 snoU13.27-201ENST00000459278 104 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 MIR8065-201ENST00000620577 100 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 Z97988.1-201ENST00000637697 135 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
EPHB3P54753 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
EPHB3P54753 MIR424-201ENST00000362227 98 ntBASIC2.11□□□□□ -2.07
EPHB3P54753 Y_RNA.244-201ENST00000364484 109 ntBASIC2.11□□□□□ -2.07
EPHB3P54753 Y_RNA.426-201ENST00000384068 113 ntBASIC2.11□□□□□ -2.07
EPHB3P54753 RNU6-342P-201ENST00000384521 104 ntBASIC2.11□□□□□ -2.07
EPHB3P54753 RNU6-482P-201ENST00000391068 107 ntBASIC2.11□□□□□ -2.07
EPHB3P54753 RNU2-7P-201ENST00000410794 178 ntBASIC2.11□□□□□ -2.07
EPHB3P54753 RPL23AP6-201ENST00000446637 472 ntBASIC2.11□□□□□ -2.07
EPHB3P54753 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
EPHB3P54753 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
EPHB3P54753 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
EPHB3P54753 RNA5SP501-201ENST00000410990 112 ntBASIC2.1□□□□□ -2.07
EPHB3P54753 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
EPHB3P54753 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
EPHB3P54753 AC103810.7-201ENST00000607821 91 ntBASIC2.1□□□□□ -2.07
EPHB3P54753 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
EPHB3P54753 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
EPHB3P54753 RNU6-1244P-201ENST00000363614 108 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 Y_RNA.354-201ENST00000365448 111 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 AC245047.7-201ENST00000440265 293 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 RNU6-857P-201ENST00000515893 110 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 RNU7-43P-201ENST00000516554 64 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.09□□□□□ -2.07
EPHB3P54753 SEPT14P17-201ENST00000617978 177 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.09□□□□□ -2.07
EPHB3P54753 AC006160.2-201ENST00000637708 154 ntBASIC2.09□□□□□ -2.07
EPHB3P54753 AL596028.1-201ENST00000326971 197 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 RNU6-509P-201ENST00000363519 107 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 Y_RNA.221-201ENST00000364248 96 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 Y_RNA.313-201ENST00000365095 103 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 Y_RNA.437-201ENST00000384113 113 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 RNY1P4-201ENST00000384595 115 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 MIR34C-201ENST00000384831 77 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 FAM106DP-201ENST00000586416 501 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 RNU6-86P-201ENST00000606534 107 ntBASIC2.08□□□□□ -2.08
EPHB3P54753 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.07□□□□□ -2.08
EPHB3P54753 Y_RNA.4-201ENST00000362333 112 ntBASIC2.07□□□□□ -2.08
EPHB3P54753 RNU6-457P-201ENST00000363999 107 ntBASIC2.07□□□□□ -2.08
EPHB3P54753 RNA5SP99-201ENST00000364020 114 ntBASIC2.07□□□□□ -2.08
EPHB3P54753 RNU6-1296P-201ENST00000383879 107 ntBASIC2.07□□□□□ -2.08
EPHB3P54753 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
EPHB3P54753 SNORA40.18-201ENST00000391200 128 ntBASIC2.07□□□□□ -2.08
EPHB3P54753 HMGN2P23-201ENST00000456759 269 ntBASIC2.07□□□□□ -2.08
EPHB3P54753 AC008133.2-201ENST00000624540 351 ntBASIC2.07□□□□□ -2.08
EPHB3P54753 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
EPHB3P54753 RNU6-633P-201ENST00000362612 103 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 SNORD114-10-201ENST00000363409 72 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 RNU6-1125P-201ENST00000363601 107 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 Y_RNA.448-201ENST00000384185 108 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 RNU6-1086P-201ENST00000410930 100 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 RNU6-602P-201ENST00000411155 105 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 RPS29P28-201ENST00000446439 141 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 SNORD67.1-201ENST00000516618 108 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 MIR6845-201ENST00000613182 61 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 MIR548BB-201ENST00000626714 66 ntBASIC2.06□□□□□ -2.08
EPHB3P54753 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms