Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
PTX3P26022 SNORD115-19-201ENST00000363098 82 ntBASIC1.59□□□□□ -2.15
PTX3P26022 SNORD115-18-201ENST00000363293 82 ntBASIC1.59□□□□□ -2.15
PTX3P26022 SNORD115-17-201ENST00000364612 82 ntBASIC1.59□□□□□ -2.15
PTX3P26022 Y_RNA.281-201ENST00000364774 94 ntBASIC1.59□□□□□ -2.15
PTX3P26022 SNORD12C-201ENST00000386307 89 ntBASIC1.59□□□□□ -2.15
PTX3P26022 RNU6-613P-201ENST00000410412 108 ntBASIC1.59□□□□□ -2.15
PTX3P26022 AC244023.1-201ENST00000426884 112 ntBASIC1.59□□□□□ -2.15
PTX3P26022 AC242498.1-201ENST00000604134 111 ntBASIC1.59□□□□□ -2.15
PTX3P26022 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
PTX3P26022 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PTX3P26022 Y_RNA.362-201ENST00000365518 110 ntBASIC1.58□□□□□ -2.16
PTX3P26022 RNU6-1086P-201ENST00000410930 100 ntBASIC1.58□□□□□ -2.16
PTX3P26022 snoU13.2-201ENST00000459201 104 ntBASIC1.58□□□□□ -2.16
PTX3P26022 AC048334.1-201ENST00000477975 159 ntBASIC1.58□□□□□ -2.16
PTX3P26022 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
PTX3P26022 MIR6516-201ENST00000630554 81 ntBASIC1.58□□□□□ -2.16
PTX3P26022 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PTX3P26022 SNORA18-201ENST00000384416 132 ntBASIC1.57□□□□□ -2.16
PTX3P26022 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
PTX3P26022 AL035461.1-201ENST00000421490 332 ntBASIC1.57□□□□□ -2.16
PTX3P26022 AC063976.4-201ENST00000421971 163 ntBASIC1.57□□□□□ -2.16
PTX3P26022 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
PTX3P26022 snoU13.26-201ENST00000459452 105 ntBASIC1.57□□□□□ -2.16
PTX3P26022 RPL39P34-201ENST00000477141 156 ntBASIC1.57□□□□□ -2.16
PTX3P26022 SNORA31.2-201ENST00000516019 134 ntBASIC1.57□□□□□ -2.16
PTX3P26022 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
PTX3P26022 RNU7-35P-201ENST00000517174 62 ntBASIC1.57□□□□□ -2.16
PTX3P26022 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.57□□□□□ -2.16
PTX3P26022 SEPT14P17-201ENST00000617978 177 ntBASIC1.57□□□□□ -2.16
PTX3P26022 AC087741.2-201ENST00000619415 172 ntBASIC1.57□□□□□ -2.16
PTX3P26022 AL589743.1-201ENST00000551932 2712 ntBASIC1.57□□□□□ -2.16
PTX3P26022 Y_RNA.49-201ENST00000362714 112 ntBASIC1.56□□□□□ -2.16
PTX3P26022 Y_RNA.85-201ENST00000363014 111 ntBASIC1.55□□□□□ -2.16
PTX3P26022 Y_RNA.344-201ENST00000365381 112 ntBASIC1.55□□□□□ -2.16
PTX3P26022 RNU6-342P-201ENST00000384521 104 ntBASIC1.55□□□□□ -2.16
PTX3P26022 RNY4P18-201ENST00000391107 89 ntBASIC1.55□□□□□ -2.16
PTX3P26022 RNA5SP237-201ENST00000410414 113 ntBASIC1.55□□□□□ -2.16
PTX3P26022 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.55□□□□□ -2.16
PTX3P26022 Y_RNA.309-201ENST00000365046 111 ntBASIC1.54□□□□□ -2.16
PTX3P26022 RNU6-580P-201ENST00000365159 107 ntBASIC1.54□□□□□ -2.16
PTX3P26022 SNORA32-201ENST00000384072 121 ntBASIC1.54□□□□□ -2.16
PTX3P26022 MIR588-201ENST00000384900 83 ntBASIC1.54□□□□□ -2.16
PTX3P26022 MIR563-201ENST00000385080 79 ntBASIC1.54□□□□□ -2.16
PTX3P26022 AL662814.1-201ENST00000617364 121 ntBASIC1.54□□□□□ -2.16
PTX3P26022 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PTX3P26022 Y_RNA.168-201ENST00000363740 102 ntBASIC1.53□□□□□ -2.16
PTX3P26022 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
PTX3P26022 Y_RNA.549-201ENST00000384657 102 ntBASIC1.53□□□□□ -2.16
PTX3P26022 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
PTX3P26022 MIR1289-2-201ENST00000408360 111 ntBASIC1.53□□□□□ -2.16
PTX3P26022 FAM71BP1-201ENST00000604431 523 ntBASIC1.53□□□□□ -2.16
PTX3P26022 AL035470.1-201ENST00000622571 220 ntBASIC1.53□□□□□ -2.16
PTX3P26022 AL162726.3-218ENST00000636401 95 ntBASIC1.53□□□□□ -2.16
PTX3P26022 Y_RNA.81-201ENST00000362997 102 ntBASIC1.52□□□□□ -2.17
PTX3P26022 SNORA63.5-201ENST00000363548 123 ntBASIC1.52□□□□□ -2.17
PTX3P26022 SNORA80D-201ENST00000384488 135 ntBASIC1.52□□□□□ -2.17
PTX3P26022 MIR1261-201ENST00000408659 82 ntBASIC1.52□□□□□ -2.17
PTX3P26022 MIR1912-201ENST00000410389 80 ntBASIC1.52□□□□□ -2.17
PTX3P26022 AL591704.2-201ENST00000421658 181 ntBASIC1.52□□□□□ -2.17
PTX3P26022 RNU7-62P-201ENST00000458856 62 ntBASIC1.52□□□□□ -2.17
PTX3P26022 MIR1270-201ENST00000459320 83 ntBASIC1.52□□□□□ -2.17
PTX3P26022 RNU7-79P-201ENST00000516082 62 ntBASIC1.52□□□□□ -2.17
PTX3P26022 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.52□□□□□ -2.17
PTX3P26022 RNU6-654P-201ENST00000364373 107 ntBASIC1.51□□□□□ -2.17
PTX3P26022 RNU6-755P-201ENST00000364400 103 ntBASIC1.51□□□□□ -2.17
PTX3P26022 RNU6-1107P-201ENST00000364817 104 ntBASIC1.51□□□□□ -2.17
PTX3P26022 Y_RNA.323-201ENST00000365157 109 ntBASIC1.51□□□□□ -2.17
PTX3P26022 RNU6-1237P-201ENST00000384777 107 ntBASIC1.51□□□□□ -2.17
PTX3P26022 MT-TF-201ENST00000387314 71 ntBASIC1.51□□□□□ -2.17
PTX3P26022 RNU6-205P-201ENST00000390858 107 ntBASIC1.51□□□□□ -2.17
PTX3P26022 SNORD12-201ENST00000391002 90 ntBASIC1.51□□□□□ -2.17
PTX3P26022 RNU6-1165P-201ENST00000410119 107 ntBASIC1.51□□□□□ -2.17
PTX3P26022 AC141846.1-201ENST00000568348 142 ntBASIC1.51□□□□□ -2.17
PTX3P26022 MIR6740-201ENST00000618268 113 ntBASIC1.51□□□□□ -2.17
PTX3P26022 Y_RNA.363-201ENST00000365529 113 ntBASIC1.5□□□□□ -2.17
PTX3P26022 RNU6-616P-201ENST00000384353 107 ntBASIC1.5□□□□□ -2.17
PTX3P26022 Y_RNA.507-201ENST00000384500 99 ntBASIC1.5□□□□□ -2.17
PTX3P26022 RNU6-910P-201ENST00000390844 107 ntBASIC1.5□□□□□ -2.17
PTX3P26022 MRPL35P3-201ENST00000421557 364 ntBASIC1.5□□□□□ -2.17
PTX3P26022 RNU7-21P-201ENST00000459430 62 ntBASIC1.5□□□□□ -2.17
PTX3P26022 SNORD79.1-201ENST00000516069 84 ntBASIC1.5□□□□□ -2.17
PTX3P26022 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
PTX3P26022 AC068339.1-201ENST00000526965 141 ntBASIC1.5□□□□□ -2.17
PTX3P26022 RNU6-94P-201ENST00000607728 107 ntBASIC1.5□□□□□ -2.17
PTX3P26022 RNU6-363P-201ENST00000362895 105 ntBASIC1.49□□□□□ -2.17
PTX3P26022 SNORD114-10-201ENST00000363409 72 ntBASIC1.49□□□□□ -2.17
PTX3P26022 SNORD113.3-201ENST00000364630 78 ntBASIC1.49□□□□□ -2.17
PTX3P26022 SNORA22-201ENST00000383907 134 ntBASIC1.49□□□□□ -2.17
PTX3P26022 RNU6-44P-201ENST00000384045 107 ntBASIC1.49□□□□□ -2.17
PTX3P26022 RNU6-816P-201ENST00000390914 107 ntBASIC1.49□□□□□ -2.17
PTX3P26022 SNORA75.2-201ENST00000391138 150 ntBASIC1.49□□□□□ -2.17
PTX3P26022 RNU6-1268P-201ENST00000391214 107 ntBASIC1.49□□□□□ -2.17
PTX3P26022 SNORA75.3-201ENST00000391231 150 ntBASIC1.49□□□□□ -2.17
PTX3P26022 RNU6-1239P-201ENST00000391310 107 ntBASIC1.49□□□□□ -2.17
PTX3P26022 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
PTX3P26022 SNORA70.22-201ENST00000517160 124 ntBASIC1.49□□□□□ -2.17
PTX3P26022 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.49□□□□□ -2.17
PTX3P26022 Y_RNA.773-201ENST00000607168 90 ntBASIC1.49□□□□□ -2.17
PTX3P26022 RNY1P13-201ENST00000365030 105 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 257.6 ms