Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNU6-1290P-201ENST00000362957 109 ntBASIC1.67□□□□□ -2.14
ATF4P18848 RNU6-580P-201ENST00000365159 107 ntBASIC1.67□□□□□ -2.14
ATF4P18848 SNORA48.3-201ENST00000391081 134 ntBASIC1.67□□□□□ -2.14
ATF4P18848 RNU6-1165P-201ENST00000410119 107 ntBASIC1.67□□□□□ -2.14
ATF4P18848 RNA5SP95-201ENST00000410319 137 ntBASIC1.67□□□□□ -2.14
ATF4P18848 RNU7-79P-201ENST00000516082 62 ntBASIC1.67□□□□□ -2.14
ATF4P18848 RNA5SP200-201ENST00000516360 103 ntBASIC1.67□□□□□ -2.14
ATF4P18848 RNU7-35P-201ENST00000517174 62 ntBASIC1.67□□□□□ -2.14
ATF4P18848 AC007012.1-201ENST00000567192 175 ntBASIC1.67□□□□□ -2.14
ATF4P18848 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
ATF4P18848 RNA5SP327-201ENST00000362494 101 ntBASIC1.66□□□□□ -2.14
ATF4P18848 SNORD116-21-201ENST00000384507 92 ntBASIC1.66□□□□□ -2.14
ATF4P18848 MIR548D2-201ENST00000384955 97 ntBASIC1.66□□□□□ -2.14
ATF4P18848 RPS29P23-201ENST00000458635 123 ntBASIC1.66□□□□□ -2.14
ATF4P18848 MIR6740-201ENST00000618268 113 ntBASIC1.66□□□□□ -2.14
ATF4P18848 AC012676.2-201ENST00000619258 186 ntBASIC1.66□□□□□ -2.14
ATF4P18848 MIR6873-201ENST00000622788 63 ntBASIC1.66□□□□□ -2.14
ATF4P18848 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.66□□□□□ -2.14
ATF4P18848 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ATF4P18848 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
ATF4P18848 SNORD26-201ENST00000384147 75 ntBASIC1.65□□□□□ -2.15
ATF4P18848 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
ATF4P18848 MT-TI-201ENST00000387365 69 ntBASIC1.65□□□□□ -2.15
ATF4P18848 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.65□□□□□ -2.15
ATF4P18848 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
ATF4P18848 MIR219B-201ENST00000637023 88 ntBASIC1.65□□□□□ -2.15
ATF4P18848 AC008163.1-202ENST00000636004 2889 ntBASIC1.65□□□□□ -2.15
ATF4P18848 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ATF4P18848 SNORD114-1-201ENST00000362705 72 ntBASIC1.64□□□□□ -2.15
ATF4P18848 RNU6-880P-201ENST00000384526 107 ntBASIC1.64□□□□□ -2.15
ATF4P18848 MIR563-201ENST00000385080 79 ntBASIC1.64□□□□□ -2.15
ATF4P18848 MT-TF-201ENST00000387314 71 ntBASIC1.64□□□□□ -2.15
ATF4P18848 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
ATF4P18848 RNU6-735P-201ENST00000410612 107 ntBASIC1.64□□□□□ -2.15
ATF4P18848 MIR18B-201ENST00000454574 71 ntBASIC1.64□□□□□ -2.15
ATF4P18848 snoU13.23-201ENST00000458863 104 ntBASIC1.64□□□□□ -2.15
ATF4P18848 AC036111.3-201ENST00000526389 112 ntBASIC1.64□□□□□ -2.15
ATF4P18848 AC141846.1-201ENST00000568348 142 ntBASIC1.64□□□□□ -2.15
ATF4P18848 AC023827.1-201ENST00000569247 97 ntBASIC1.64□□□□□ -2.15
ATF4P18848 MIR4679-2-201ENST00000578358 77 ntBASIC1.64□□□□□ -2.15
ATF4P18848 FAM71BP1-201ENST00000604431 523 ntBASIC1.64□□□□□ -2.15
ATF4P18848 AC106800.4-201ENST00000614905 153 ntBASIC1.64□□□□□ -2.15
ATF4P18848 MIR7843-201ENST00000622274 79 ntBASIC1.64□□□□□ -2.15
ATF4P18848 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
ATF4P18848 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.63□□□□□ -2.15
ATF4P18848 RNU6-412P-201ENST00000516434 106 ntBASIC1.63□□□□□ -2.15
ATF4P18848 SNORA4-201ENST00000584302 138 ntBASIC1.63□□□□□ -2.15
ATF4P18848 SNORA25.8-201ENST00000364831 128 ntBASIC1.62□□□□□ -2.15
ATF4P18848 AC063976.4-201ENST00000421971 163 ntBASIC1.62□□□□□ -2.15
ATF4P18848 AC087741.2-201ENST00000619415 172 ntBASIC1.62□□□□□ -2.15
ATF4P18848 AL589743.1-201ENST00000551932 2712 ntBASIC1.62□□□□□ -2.15
ATF4P18848 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ATF4P18848 SNORD115-19-201ENST00000363098 82 ntBASIC1.61□□□□□ -2.15
ATF4P18848 SNORD115-18-201ENST00000363293 82 ntBASIC1.61□□□□□ -2.15
ATF4P18848 SNORD115-17-201ENST00000364612 82 ntBASIC1.61□□□□□ -2.15
ATF4P18848 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.61□□□□□ -2.15
ATF4P18848 RNU6-994P-201ENST00000410507 111 ntBASIC1.61□□□□□ -2.15
ATF4P18848 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.61□□□□□ -2.15
ATF4P18848 AC019288.1-201ENST00000557918 224 ntBASIC1.61□□□□□ -2.15
ATF4P18848 MIR4524B-201ENST00000581569 115 ntBASIC1.61□□□□□ -2.15
ATF4P18848 RNA5SP432-201ENST00000362480 116 ntBASIC1.6□□□□□ -2.15
ATF4P18848 RNY1P13-201ENST00000365030 105 ntBASIC1.6□□□□□ -2.15
ATF4P18848 Y_RNA.362-201ENST00000365518 110 ntBASIC1.6□□□□□ -2.15
ATF4P18848 RNU6-949P-201ENST00000384040 107 ntBASIC1.6□□□□□ -2.15
ATF4P18848 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ATF4P18848 RNU6-934P-201ENST00000365154 107 ntBASIC1.59□□□□□ -2.15
ATF4P18848 Y_RNA.507-201ENST00000384500 99 ntBASIC1.59□□□□□ -2.15
ATF4P18848 AC002429.1-201ENST00000437672 148 ntBASIC1.59□□□□□ -2.15
ATF4P18848 AC067940.1-201ENST00000458411 300 ntBASIC1.59□□□□□ -2.15
ATF4P18848 RPL39P34-201ENST00000477141 156 ntBASIC1.59□□□□□ -2.15
ATF4P18848 MIR6129-201ENST00000616087 109 ntBASIC1.59□□□□□ -2.15
ATF4P18848 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ATF4P18848 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
ATF4P18848 MIR30D-201ENST00000362283 70 ntBASIC1.58□□□□□ -2.16
ATF4P18848 Y_RNA.49-201ENST00000362714 112 ntBASIC1.58□□□□□ -2.16
ATF4P18848 SNORD114-10-201ENST00000363409 72 ntBASIC1.58□□□□□ -2.16
ATF4P18848 RNU6-482P-201ENST00000391068 107 ntBASIC1.58□□□□□ -2.16
ATF4P18848 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ATF4P18848 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.58□□□□□ -2.16
ATF4P18848 AC027335.2-201ENST00000624030 375 ntBASIC1.58□□□□□ -2.16
ATF4P18848 Y_RNA.35-201ENST00000362601 101 ntBASIC1.57□□□□□ -2.16
ATF4P18848 SNORA63.5-201ENST00000363548 123 ntBASIC1.57□□□□□ -2.16
ATF4P18848 RNU6-1325P-201ENST00000364905 105 ntBASIC1.57□□□□□ -2.16
ATF4P18848 Y_RNA.344-201ENST00000365381 112 ntBASIC1.57□□□□□ -2.16
ATF4P18848 RNU6-616P-201ENST00000384353 107 ntBASIC1.57□□□□□ -2.16
ATF4P18848 MIR1912-201ENST00000410389 80 ntBASIC1.57□□□□□ -2.16
ATF4P18848 SNORD67.1-201ENST00000516618 108 ntBASIC1.57□□□□□ -2.16
ATF4P18848 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.57□□□□□ -2.16
ATF4P18848 Y_RNA.309-201ENST00000365046 111 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-447P-201ENST00000410293 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-1118P-201ENST00000410382 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-1076P-201ENST00000410397 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-355P-201ENST00000410427 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-791P-201ENST00000410467 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-705P-201ENST00000410601 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-1100P-201ENST00000410691 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-860P-201ENST00000410860 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-1217P-201ENST00000411276 104 ntBASIC1.56□□□□□ -2.16
ATF4P18848 RNU6-785P-201ENST00000411324 104 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms