Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
KRT3P12035 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
KRT3P12035 RNU6-597P-201ENST00000365620 102 ntBASIC0.51□□□□□ -2.33
KRT3P12035 RNU6-1292P-201ENST00000383856 107 ntBASIC0.51□□□□□ -2.33
KRT3P12035 MIR140-201ENST00000385282 100 ntBASIC0.51□□□□□ -2.33
KRT3P12035 AC092628.1-201ENST00000436250 252 ntBASIC0.51□□□□□ -2.33
KRT3P12035 AC008608.1-201ENST00000603910 127 ntBASIC0.51□□□□□ -2.33
KRT3P12035 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.51□□□□□ -2.33
KRT3P12035 U4.1-201ENST00000620349 87 ntBASIC0.51□□□□□ -2.33
KRT3P12035 Y_RNA.60-201ENST00000362831 98 ntBASIC0.5□□□□□ -2.33
KRT3P12035 RNU6-403P-201ENST00000363163 104 ntBASIC0.5□□□□□ -2.33
KRT3P12035 RNU6-196P-201ENST00000384315 107 ntBASIC0.5□□□□□ -2.33
KRT3P12035 Y_RNA.539-201ENST00000384635 107 ntBASIC0.5□□□□□ -2.33
KRT3P12035 RNU4-43P-201ENST00000410628 137 ntBASIC0.5□□□□□ -2.33
KRT3P12035 RNA5SP127-201ENST00000411051 133 ntBASIC0.5□□□□□ -2.33
KRT3P12035 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.5□□□□□ -2.33
KRT3P12035 MIR4308-201ENST00000580634 81 ntBASIC0.5□□□□□ -2.33
KRT3P12035 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
KRT3P12035 RNY1-201ENST00000364228 113 ntBASIC0.49□□□□□ -2.33
KRT3P12035 RNU6-643P-201ENST00000384018 107 ntBASIC0.49□□□□□ -2.33
KRT3P12035 RNU6-574P-201ENST00000384265 107 ntBASIC0.49□□□□□ -2.33
KRT3P12035 Y_RNA.562-201ENST00000384695 113 ntBASIC0.49□□□□□ -2.33
KRT3P12035 SNORA26.6-201ENST00000391256 115 ntBASIC0.49□□□□□ -2.33
KRT3P12035 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.49□□□□□ -2.33
KRT3P12035 RNU4-83P-201ENST00000410863 133 ntBASIC0.49□□□□□ -2.33
KRT3P12035 RNU6-1149P-201ENST00000516810 97 ntBASIC0.49□□□□□ -2.33
KRT3P12035 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
KRT3P12035 AL365205.2-201ENST00000594586 68 ntBASIC0.49□□□□□ -2.33
KRT3P12035 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
KRT3P12035 MIR30D-201ENST00000362283 70 ntBASIC0.48□□□□□ -2.33
KRT3P12035 Y_RNA.20-201ENST00000362479 113 ntBASIC0.48□□□□□ -2.33
KRT3P12035 SNORA22.1-201ENST00000362701 134 ntBASIC0.48□□□□□ -2.33
KRT3P12035 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
KRT3P12035 SNORA25.7-201ENST00000364375 127 ntBASIC0.48□□□□□ -2.33
KRT3P12035 RNU6-702P-201ENST00000364982 107 ntBASIC0.48□□□□□ -2.33
KRT3P12035 RNA5SP117-201ENST00000365294 118 ntBASIC0.48□□□□□ -2.33
KRT3P12035 RNU6-1336P-201ENST00000383886 109 ntBASIC0.48□□□□□ -2.33
KRT3P12035 Y_RNA.478-201ENST00000384358 107 ntBASIC0.48□□□□□ -2.33
KRT3P12035 MT-TF-201ENST00000387314 71 ntBASIC0.48□□□□□ -2.33
KRT3P12035 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
KRT3P12035 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
KRT3P12035 MTND3P2-201ENST00000438452 342 ntBASIC0.48□□□□□ -2.33
KRT3P12035 RNU6-111P-201ENST00000517179 105 ntBASIC0.48□□□□□ -2.33
KRT3P12035 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
KRT3P12035 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.48□□□□□ -2.33
KRT3P12035 AC021613.1-201ENST00000623880 111 ntBASIC0.48□□□□□ -2.33
KRT3P12035 Y_RNA.121-201ENST00000363309 113 ntBASIC0.47□□□□□ -2.33
KRT3P12035 MIR613-201ENST00000385248 95 ntBASIC0.47□□□□□ -2.33
KRT3P12035 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.47□□□□□ -2.33
KRT3P12035 Y_RNA.668-201ENST00000516233 93 ntBASIC0.47□□□□□ -2.33
KRT3P12035 Y_RNA.680-201ENST00000516441 93 ntBASIC0.47□□□□□ -2.33
KRT3P12035 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
KRT3P12035 MIR4503-201ENST00000582187 83 ntBASIC0.47□□□□□ -2.33
KRT3P12035 U6.106-201ENST00000636360 105 ntBASIC0.47□□□□□ -2.33
KRT3P12035 AL589743.1-201ENST00000551932 2712 ntBASIC0.46□□□□□ -2.34
KRT3P12035 RNU6-978P-201ENST00000364371 103 ntBASIC0.46□□□□□ -2.34
KRT3P12035 Y_RNA.447-201ENST00000384184 113 ntBASIC0.46□□□□□ -2.34
KRT3P12035 Y_RNA.466-201ENST00000384294 113 ntBASIC0.46□□□□□ -2.34
KRT3P12035 SNORA72.6-201ENST00000384520 129 ntBASIC0.46□□□□□ -2.34
KRT3P12035 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.46□□□□□ -2.34
KRT3P12035 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.46□□□□□ -2.34
KRT3P12035 RNU4-71P-201ENST00000516258 113 ntBASIC0.46□□□□□ -2.34
KRT3P12035 MIR6515-201ENST00000619843 57 ntBASIC0.46□□□□□ -2.34
KRT3P12035 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
KRT3P12035 Y_RNA.307-201ENST00000365022 117 ntBASIC0.45□□□□□ -2.34
KRT3P12035 MIR598-201ENST00000384868 97 ntBASIC0.45□□□□□ -2.34
KRT3P12035 SNORA25.12-201ENST00000516202 82 ntBASIC0.45□□□□□ -2.34
KRT3P12035 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
KRT3P12035 AL662814.1-201ENST00000617364 121 ntBASIC0.45□□□□□ -2.34
KRT3P12035 PVT1_3.1-201ENST00000620853 95 ntBASIC0.45□□□□□ -2.34
KRT3P12035 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
KRT3P12035 MTND5P32-201ENST00000560711 1802 ntBASIC0.45□□□□□ -2.34
KRT3P12035 RNU6-275P-201ENST00000364910 107 ntBASIC0.44□□□□□ -2.34
KRT3P12035 Y_RNA.412-201ENST00000384001 104 ntBASIC0.44□□□□□ -2.34
KRT3P12035 RNU6-342P-201ENST00000384521 104 ntBASIC0.44□□□□□ -2.34
KRT3P12035 Y_RNA.515-201ENST00000384535 112 ntBASIC0.44□□□□□ -2.34
KRT3P12035 MIR563-201ENST00000385080 79 ntBASIC0.44□□□□□ -2.34
KRT3P12035 RNU6-448P-201ENST00000517052 107 ntBASIC0.44□□□□□ -2.34
KRT3P12035 AC090897.1-201ENST00000580909 226 ntBASIC0.44□□□□□ -2.34
KRT3P12035 MIR3149-201ENST00000584629 83 ntBASIC0.44□□□□□ -2.34
KRT3P12035 SNORD92-201ENST00000585078 85 ntBASIC0.44□□□□□ -2.34
KRT3P12035 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
KRT3P12035 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
KRT3P12035 Y_RNA.83-201ENST00000363005 113 ntBASIC0.43□□□□□ -2.34
KRT3P12035 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
KRT3P12035 SNORA18-201ENST00000384416 132 ntBASIC0.43□□□□□ -2.34
KRT3P12035 MIR624-201ENST00000385217 97 ntBASIC0.43□□□□□ -2.34
KRT3P12035 AC002350.1-201ENST00000490759 375 ntBASIC0.43□□□□□ -2.34
KRT3P12035 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.43□□□□□ -2.34
KRT3P12035 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
KRT3P12035 SNORD114-26-201ENST00000363543 72 ntBASIC0.42□□□□□ -2.34
KRT3P12035 Y_RNA.430-201ENST00000384081 110 ntBASIC0.42□□□□□ -2.34
KRT3P12035 Y_RNA.617-201ENST00000410920 90 ntBASIC0.42□□□□□ -2.34
KRT3P12035 RNU6-1023P-201ENST00000516137 106 ntBASIC0.42□□□□□ -2.34
KRT3P12035 AC141846.1-201ENST00000568348 142 ntBASIC0.42□□□□□ -2.34
KRT3P12035 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.42□□□□□ -2.34
KRT3P12035 Y_RNA.13-201ENST00000362403 112 ntBASIC0.41□□□□□ -2.34
KRT3P12035 RNU6-1020P-201ENST00000363684 107 ntBASIC0.41□□□□□ -2.34
KRT3P12035 Y_RNA.200-201ENST00000364018 102 ntBASIC0.41□□□□□ -2.34
KRT3P12035 U8.15-201ENST00000390947 134 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms