Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 SNORD113.3-201ENST00000364630 78 ntBASIC1.65□□□□□ -2.15
KLF4O43474 Y_RNA.291-201ENST00000364886 113 ntBASIC1.65□□□□□ -2.15
KLF4O43474 SNORA18-201ENST00000384416 132 ntBASIC1.65□□□□□ -2.15
KLF4O43474 Y_RNA.630-201ENST00000411370 108 ntBASIC1.65□□□□□ -2.15
KLF4O43474 RPL39P25-201ENST00000449384 154 ntBASIC1.65□□□□□ -2.15
KLF4O43474 RPS29P23-201ENST00000458635 123 ntBASIC1.65□□□□□ -2.15
KLF4O43474 SNORD79.1-201ENST00000516069 84 ntBASIC1.65□□□□□ -2.15
KLF4O43474 RNU6-1258P-201ENST00000516911 111 ntBASIC1.65□□□□□ -2.15
KLF4O43474 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
KLF4O43474 Y_RNA.168-201ENST00000363740 102 ntBASIC1.64□□□□□ -2.15
KLF4O43474 Y_RNA.525-201ENST00000384570 113 ntBASIC1.64□□□□□ -2.15
KLF4O43474 RNU6-1237P-201ENST00000384777 107 ntBASIC1.64□□□□□ -2.15
KLF4O43474 SNORA75.2-201ENST00000391138 150 ntBASIC1.64□□□□□ -2.15
KLF4O43474 SNORA75.3-201ENST00000391231 150 ntBASIC1.64□□□□□ -2.15
KLF4O43474 Y_RNA.649-201ENST00000459077 103 ntBASIC1.64□□□□□ -2.15
KLF4O43474 RNU7-21P-201ENST00000459430 62 ntBASIC1.64□□□□□ -2.15
KLF4O43474 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
KLF4O43474 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KLF4O43474 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KLF4O43474 Y_RNA.470-201ENST00000384307 117 ntBASIC1.63□□□□□ -2.15
KLF4O43474 SNORA25-201ENST00000384384 134 ntBASIC1.63□□□□□ -2.15
KLF4O43474 SNORD111-201ENST00000408139 94 ntBASIC1.63□□□□□ -2.15
KLF4O43474 AC003989.2-201ENST00000440224 169 ntBASIC1.63□□□□□ -2.15
KLF4O43474 RNU7-6P-201ENST00000516845 62 ntBASIC1.63□□□□□ -2.15
KLF4O43474 RNU6-654P-201ENST00000364373 107 ntBASIC1.62□□□□□ -2.15
KLF4O43474 RNU6-1056P-201ENST00000383996 107 ntBASIC1.62□□□□□ -2.15
KLF4O43474 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
KLF4O43474 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.62□□□□□ -2.15
KLF4O43474 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.62□□□□□ -2.15
KLF4O43474 RNU6-1086P-201ENST00000410930 100 ntBASIC1.62□□□□□ -2.15
KLF4O43474 RNA5SP458-201ENST00000516188 119 ntBASIC1.62□□□□□ -2.15
KLF4O43474 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
KLF4O43474 AC022523.2-201ENST00000561045 150 ntBASIC1.62□□□□□ -2.15
KLF4O43474 MIR548AE2-201ENST00000583456 67 ntBASIC1.62□□□□□ -2.15
KLF4O43474 RNA5SP327-201ENST00000362494 101 ntBASIC1.61□□□□□ -2.15
KLF4O43474 SNORA25.8-201ENST00000364831 128 ntBASIC1.61□□□□□ -2.15
KLF4O43474 RNU6-1104P-201ENST00000384723 104 ntBASIC1.61□□□□□ -2.15
KLF4O43474 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
KLF4O43474 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.61□□□□□ -2.15
KLF4O43474 AC012676.2-201ENST00000619258 186 ntBASIC1.61□□□□□ -2.15
KLF4O43474 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
KLF4O43474 AC008163.1-202ENST00000636004 2889 ntBASIC1.61□□□□□ -2.15
KLF4O43474 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KLF4O43474 Y_RNA.273-201ENST00000364703 102 ntBASIC1.6□□□□□ -2.15
KLF4O43474 RNU6-580P-201ENST00000365159 107 ntBASIC1.6□□□□□ -2.15
KLF4O43474 Y_RNA.363-201ENST00000365529 113 ntBASIC1.6□□□□□ -2.15
KLF4O43474 SNORA32-201ENST00000384072 121 ntBASIC1.6□□□□□ -2.15
KLF4O43474 SNORD26-201ENST00000384147 75 ntBASIC1.6□□□□□ -2.15
KLF4O43474 RNU6-1165P-201ENST00000410119 107 ntBASIC1.6□□□□□ -2.15
KLF4O43474 RNU6-1064P-201ENST00000410626 104 ntBASIC1.6□□□□□ -2.15
KLF4O43474 RNU1-98P-201ENST00000458992 160 ntBASIC1.6□□□□□ -2.15
KLF4O43474 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.6□□□□□ -2.15
KLF4O43474 MTND5P34-201ENST00000568888 325 ntBASIC1.6□□□□□ -2.15
KLF4O43474 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
KLF4O43474 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.6□□□□□ -2.15
KLF4O43474 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
KLF4O43474 Y_RNA.353-201ENST00000365440 108 ntBASIC1.59□□□□□ -2.15
KLF4O43474 RNU6-342P-201ENST00000384521 104 ntBASIC1.59□□□□□ -2.15
KLF4O43474 MT-TF-201ENST00000387314 71 ntBASIC1.59□□□□□ -2.15
KLF4O43474 Y_RNA.629-201ENST00000411368 105 ntBASIC1.59□□□□□ -2.15
KLF4O43474 AC063976.4-201ENST00000421971 163 ntBASIC1.59□□□□□ -2.15
KLF4O43474 MIR18B-201ENST00000454574 71 ntBASIC1.59□□□□□ -2.15
KLF4O43474 RNU7-79P-201ENST00000516082 62 ntBASIC1.59□□□□□ -2.15
KLF4O43474 SNORD33.1-201ENST00000516213 88 ntBASIC1.59□□□□□ -2.15
KLF4O43474 RNU7-35P-201ENST00000517174 62 ntBASIC1.59□□□□□ -2.15
KLF4O43474 AC106800.4-201ENST00000614905 153 ntBASIC1.59□□□□□ -2.15
KLF4O43474 AL662814.1-201ENST00000617364 121 ntBASIC1.59□□□□□ -2.15
KLF4O43474 AC084768.2-201ENST00000622736 221 ntBASIC1.59□□□□□ -2.15
KLF4O43474 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KLF4O43474 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
KLF4O43474 RNA5SP95-201ENST00000410319 137 ntBASIC1.58□□□□□ -2.16
KLF4O43474 AC067940.1-201ENST00000458411 300 ntBASIC1.58□□□□□ -2.16
KLF4O43474 AC036111.3-201ENST00000526389 112 ntBASIC1.58□□□□□ -2.16
KLF4O43474 MIR6740-201ENST00000618268 113 ntBASIC1.58□□□□□ -2.16
KLF4O43474 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.58□□□□□ -2.16
KLF4O43474 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KLF4O43474 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
KLF4O43474 RNU6-476P-201ENST00000384726 107 ntBASIC1.57□□□□□ -2.16
KLF4O43474 MIR548D2-201ENST00000384955 97 ntBASIC1.57□□□□□ -2.16
KLF4O43474 SNORA17.3-201ENST00000391159 129 ntBASIC1.57□□□□□ -2.16
KLF4O43474 RNU6-994P-201ENST00000410507 111 ntBASIC1.57□□□□□ -2.16
KLF4O43474 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
KLF4O43474 AC019288.1-201ENST00000557918 224 ntBASIC1.57□□□□□ -2.16
KLF4O43474 AC007012.1-201ENST00000567192 175 ntBASIC1.57□□□□□ -2.16
KLF4O43474 AC141846.1-201ENST00000568348 142 ntBASIC1.57□□□□□ -2.16
KLF4O43474 AC023827.1-201ENST00000569247 97 ntBASIC1.57□□□□□ -2.16
KLF4O43474 SNORA4-201ENST00000584302 138 ntBASIC1.57□□□□□ -2.16
KLF4O43474 FAM71BP1-201ENST00000604431 523 ntBASIC1.57□□□□□ -2.16
KLF4O43474 RNA5SP190-201ENST00000365222 118 ntBASIC1.56□□□□□ -2.16
KLF4O43474 RNU6-1144P-201ENST00000384247 104 ntBASIC1.56□□□□□ -2.16
KLF4O43474 MIR548A1-201ENST00000385041 97 ntBASIC1.56□□□□□ -2.16
KLF4O43474 MIR563-201ENST00000385080 79 ntBASIC1.56□□□□□ -2.16
KLF4O43474 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.56□□□□□ -2.16
KLF4O43474 MIR3122-201ENST00000577243 73 ntBASIC1.56□□□□□ -2.16
KLF4O43474 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
KLF4O43474 SNORD116-21-201ENST00000384507 92 ntBASIC1.55□□□□□ -2.16
KLF4O43474 AC108667.1-201ENST00000428618 249 ntBASIC1.55□□□□□ -2.16
KLF4O43474 AC002429.1-201ENST00000437672 148 ntBASIC1.55□□□□□ -2.16
KLF4O43474 RNU6-412P-201ENST00000516434 106 ntBASIC1.55□□□□□ -2.16
KLF4O43474 AL589743.1-201ENST00000551932 2712 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms