Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SNORA63.5-201ENST00000363548 123 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 RNU6-726P-201ENST00000364680 107 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 MTND4LP11-201ENST00000422184 280 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 MTND1P34-201ENST00000438556 671 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 RPS29P8-201ENST00000445109 171 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 U8.20-201ENST00000459445 131 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 MRPS35P2-201ENST00000508242 191 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 SNORD116.3-201ENST00000517176 78 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 DEFB131E-201ENST00000532329 154 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 MIR5589-201ENST00000579442 60 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 MIR4432-201ENST00000581823 84 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 AC084782.3-201ENST00000612282 578 ntBASIC-0.61□□□□□ -2.51
VAPAQ9P0L0 SNORD115-24-201ENST00000363528 82 ntBASIC-0.62□□□□□ -2.51
VAPAQ9P0L0 SNORA22B-201ENST00000383876 138 ntBASIC-0.62□□□□□ -2.51
VAPAQ9P0L0 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.62□□□□□ -2.51
VAPAQ9P0L0 AP003733.2-201ENST00000529409 171 ntBASIC-0.62□□□□□ -2.51
VAPAQ9P0L0 NAMPTP3-201ENST00000569273 224 ntBASIC-0.62□□□□□ -2.51
VAPAQ9P0L0 MIR5692C2-201ENST00000577959 77 ntBASIC-0.62□□□□□ -2.51
VAPAQ9P0L0 MIR4493-201ENST00000584016 73 ntBASIC-0.62□□□□□ -2.51
VAPAQ9P0L0 AL162376.1-201ENST00000624117 175 ntBASIC-0.62□□□□□ -2.51
VAPAQ9P0L0 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.63□□□□□ -2.51
VAPAQ9P0L0 AC016907.1-201ENST00000419483 435 ntBASIC-0.63□□□□□ -2.51
VAPAQ9P0L0 AC138749.4-201ENST00000563970 127 ntBASIC-0.63□□□□□ -2.51
VAPAQ9P0L0 MIR4636-201ENST00000582271 80 ntBASIC-0.63□□□□□ -2.51
VAPAQ9P0L0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.63□□□□□ -2.51
VAPAQ9P0L0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 U8.6-201ENST00000364939 135 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 SNORA75.1-201ENST00000391130 148 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 MIR1912-201ENST00000410389 80 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 RNU6-531P-201ENST00000516694 104 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 C8orf59P2-201ENST00000603441 271 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 uc_338.28-201ENST00000612082 187 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 AC084368.1-201ENST00000620935 65 ntBASIC-0.64□□□□□ -2.51
VAPAQ9P0L0 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 SNORA25.7-201ENST00000364375 127 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 SNORA1-201ENST00000384107 130 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 SNORA20-201ENST00000384662 132 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 MTND4P19-201ENST00000446659 478 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 MIR378D2-201ENST00000580636 98 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 RN7SL660P-201ENST00000614852 299 ntBASIC-0.65□□□□□ -2.51
VAPAQ9P0L0 MIR148A-201ENST00000362215 68 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 RNY1P13-201ENST00000365030 105 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 SNORA18-201ENST00000384416 132 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 RNU7-80P-201ENST00000459562 61 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 MIR4263-201ENST00000584745 83 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 AC113139.1-201ENST00000605049 239 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 AC091932.4-201ENST00000623386 200 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 AL391099.1-201ENST00000624635 187 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 MTND4LP32-201ENST00000636111 270 ntBASIC-0.66□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 SNORD81.2-201ENST00000365153 76 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 MIR876-201ENST00000401147 81 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 SNORD75.1-201ENST00000408373 60 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 AL022718.1-201ENST00000412004 84 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 BX276092.1-201ENST00000427368 251 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 AC109327.2-201ENST00000448339 378 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 AC025253.1-201ENST00000613623 543 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 AL138825.1-201ENST00000618587 192 ntBASIC-0.67□□□□□ -2.52
VAPAQ9P0L0 MIR101-2-201ENST00000362195 79 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 RNU6-623P-201ENST00000363143 105 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 RNU4-58P-201ENST00000363192 141 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 SNORD113-8-201ENST00000363497 74 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 RNU4-10P-201ENST00000364383 140 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 MIR516B1-201ENST00000385211 90 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 RNA5SP451-201ENST00000410588 110 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 PMCHL1-202ENST00000423102 261 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 RNU7-104P-201ENST00000459398 79 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 RNU6-507P-201ENST00000516045 100 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 SNORA40.14-201ENST00000516543 86 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 RNU7-161P-201ENST00000517289 62 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 MIR376A2-201ENST00000636782 80 ntBASIC-0.68□□□□□ -2.52
VAPAQ9P0L0 SNORA22.1-201ENST00000362701 134 ntBASIC-0.69□□□□□ -2.52
VAPAQ9P0L0 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms