Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU7-79P-201ENST00000516082 62 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 Y_RNA.705-201ENST00000516862 110 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
SSU72Q9NP77 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 SEPT14P17-201ENST00000617978 177 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.23□□□□□ -2.05
SSU72Q9NP77 SCARNA15.3-201ENST00000626315 122 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 AL365361.1-201ENST00000566942 3481 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 RNU6-675P-201ENST00000384236 104 ntBASIC2.22□□□□□ -2.05
SSU72Q9NP77 MIR128-1-201ENST00000384921 82 ntBASIC2.22□□□□□ -2.05
SSU72Q9NP77 SUMO1P4-201ENST00000429430 302 ntBASIC2.22□□□□□ -2.05
SSU72Q9NP77 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
SSU72Q9NP77 AC025033.1-201ENST00000463883 194 ntBASIC2.22□□□□□ -2.05
SSU72Q9NP77 RNA5SP445-201ENST00000515889 115 ntBASIC2.22□□□□□ -2.05
SSU72Q9NP77 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.22□□□□□ -2.05
SSU72Q9NP77 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SSU72Q9NP77 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SSU72Q9NP77 Y_RNA.73-201ENST00000362910 113 ntBASIC2.21□□□□□ -2.06
SSU72Q9NP77 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
SSU72Q9NP77 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
SSU72Q9NP77 RNU6-267P-201ENST00000516714 103 ntBASIC2.21□□□□□ -2.06
SSU72Q9NP77 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
SSU72Q9NP77 MIR4439-201ENST00000583746 80 ntBASIC2.21□□□□□ -2.06
SSU72Q9NP77 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.21□□□□□ -2.06
SSU72Q9NP77 MIR4251-201ENST00000635819 61 ntBASIC2.21□□□□□ -2.06
SSU72Q9NP77 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
SSU72Q9NP77 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SSU72Q9NP77 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
SSU72Q9NP77 RNU6-219P-201ENST00000364728 107 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 Y_RNA.354-201ENST00000365448 111 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 SNORD58A-201ENST00000383875 65 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 RNU6-439P-201ENST00000384188 106 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 SNORD41-201ENST00000386967 70 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 RNU6-1321P-201ENST00000390905 107 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 SNORA48.2-201ENST00000390926 124 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 RNU6-972P-201ENST00000391208 107 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 RNU6-1086P-201ENST00000410930 100 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 COTL1P1-201ENST00000422309 375 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 AC022137.1-201ENST00000483735 151 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 RNU7-137P-201ENST00000516788 62 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 GTF3AP2-201ENST00000557014 266 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.2□□□□□ -2.06
SSU72Q9NP77 MIR5194-201ENST00000582634 120 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 AC096720.1-201ENST00000604441 183 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 RNU6-86P-201ENST00000606534 107 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 AC105081.1-201ENST00000617727 106 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 AL137790.1-201ENST00000634283 177 ntBASIC2.2□□□□□ -2.06
SSU72Q9NP77 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SSU72Q9NP77 RNA5SP276-201ENST00000362580 94 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 Y_RNA.219-201ENST00000364232 113 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 SNORA67.4-201ENST00000384688 142 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 RNU6-813P-201ENST00000384691 107 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 SNORD78.1-201ENST00000390866 65 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 U8.15-201ENST00000390947 134 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 RNU6-402P-201ENST00000410678 103 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 RPL31P63-201ENST00000422565 375 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 AC009474.2-201ENST00000451383 136 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 Y_RNA.685-201ENST00000516532 108 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 AP006437.1-201ENST00000641440 3685 ntBASIC2.19□□□□□ -2.06
SSU72Q9NP77 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
SSU72Q9NP77 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
SSU72Q9NP77 SNORD38.1-201ENST00000363863 68 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 RNY1P1-201ENST00000364372 112 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 RNY1P13-201ENST00000365030 105 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 Y_RNA.448-201ENST00000384185 108 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SSU72Q9NP77 SNORD23.1-201ENST00000408212 104 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 AL445685.2-201ENST00000422551 342 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 AC244023.1-201ENST00000426884 112 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 CYP3A52P-201ENST00000563326 91 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 MIR3192-201ENST00000584920 77 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 AC242498.1-201ENST00000604134 111 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
SSU72Q9NP77 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SSU72Q9NP77 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.18□□□□□ -2.06
SSU72Q9NP77 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SSU72Q9NP77 AC062016.1-201ENST00000355719 319 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 RNU6-228P-201ENST00000362700 106 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 Y_RNA.96-201ENST00000363092 109 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 SNORD114-10-201ENST00000363409 72 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 RNA5SP68-201ENST00000363885 119 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 RNA5SP138-201ENST00000365098 114 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 RNU6-787P-201ENST00000384032 107 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 MIR1302-7-201ENST00000408841 72 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 JTBP1-201ENST00000441314 247 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 snoU13.25-201ENST00000458945 104 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 RNA5SP395-201ENST00000516567 118 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.17□□□□□ -2.06
SSU72Q9NP77 SNORD53-201ENST00000579969 78 ntBASIC2.17□□□□□ -2.06
SSU72Q9NP77 AP000942.3-201ENST00000603702 160 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 709.4 ms