Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 AL138752.1-201ENST00000452964 351 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.720-201ENST00000517166 92 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 AP003072.1-201ENST00000531740 145 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 AL365265.1-201ENST00000621045 234 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR18A-201ENST00000362310 71 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.251-201ENST00000364551 99 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.326-201ENST00000365176 113 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 SNORA36.2-201ENST00000384004 127 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 SNORA26.6-201ENST00000391256 115 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR1197-201ENST00000408818 88 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 RNA5SP127-201ENST00000411051 133 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 AL442663.2-201ENST00000554385 511 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 AC011921.3-201ENST00000605540 361 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.37□□□□□ -2.35
CDC42EP4Q9H3Q1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR30D-201ENST00000362283 70 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.461-201ENST00000384263 103 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-1160P-201ENST00000384546 104 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.574-201ENST00000384766 95 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 SNORD12C-201ENST00000386307 89 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR938-201ENST00000401216 83 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR1302-6-201ENST00000408466 90 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-561P-201ENST00000516222 102 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR4643-201ENST00000577473 78 ntBASIC0.36□□□□□ -2.35
CDC42EP4Q9H3Q1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.7-201ENST00000362352 102 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-238P-201ENST00000363313 106 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU4-45P-201ENST00000365469 141 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.416-201ENST00000384014 113 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR125B2-201ENST00000385128 89 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU4-43P-201ENST00000410628 137 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU7-185P-201ENST00000459215 60 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR5197-201ENST00000583721 112 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 AC008608.1-201ENST00000603910 127 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR6717-201ENST00000622747 73 ntBASIC0.35□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 SNORD100-201ENST00000408573 76 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 AC090897.1-201ENST00000580909 226 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR3129-201ENST00000581095 76 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 SNORD92-201ENST00000585078 85 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 AC006504.6-201ENST00000590142 199 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 AL365205.2-201ENST00000594586 68 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 U6.104-201ENST00000637979 90 ntBASIC0.34□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.76-201ENST00000362931 109 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU4-17P-201ENST00000365598 141 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.396-201ENST00000383949 103 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 MT-TF-201ENST00000387314 71 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU7-45P-201ENST00000459460 63 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 SNORA62.5-201ENST00000516634 120 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 AL117187.1-201ENST00000555482 181 ntBASIC0.33□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR342-201ENST00000362212 99 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 RNA5SP257-201ENST00000363023 116 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-728P-201ENST00000365375 104 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR606-201ENST00000384851 96 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR1257-201ENST00000408490 117 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU7-102P-201ENST00000458948 62 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 Z83818.1-201ENST00000603584 150 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 AL442067.1-201ENST00000613261 223 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 AC091932.4-201ENST00000623386 200 ntBASIC0.32□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.145-201ENST00000363527 102 ntBASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-103P-201ENST00000363686 107 ntBASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.618-201ENST00000410949 107 ntBASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU7-156P-201ENST00000517214 74 ntBASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 AL162730.1-201ENST00000605734 292 ntBASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.31□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR302B-201ENST00000362188 73 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.277-201ENST00000364754 102 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.292-201ENST00000364904 97 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-597P-201ENST00000365620 102 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 249.8 ms