Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 AL773524.1-201ENST00000614065 229 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 AC012531.4-201ENST00000616509 177 ntBASIC2.38□□□□□ -2.03
TRIM56Q9BRZ2 Y_RNA.290-201ENST00000364879 114 ntBASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 MIR653-201ENST00000385279 96 ntBASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 AL161935.2-201ENST00000414627 60 ntBASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 HMGN1P33-201ENST00000432945 451 ntBASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 MIR4764-201ENST00000580680 88 ntBASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 MIR8055-201ENST00000610739 97 ntBASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM56Q9BRZ2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-60P-201ENST00000364792 103 ntBASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-644P-201ENST00000391155 98 ntBASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 AC245047.7-201ENST00000440265 293 ntBASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 MIR7843-201ENST00000622274 79 ntBASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 Z97988.1-201ENST00000637697 135 ntBASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM56Q9BRZ2 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 Y_RNA.95-201ENST00000363079 95 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 U8.2-201ENST00000363156 134 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-203P-201ENST00000384038 104 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 MIR520C-201ENST00000385005 87 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 AC108729.3-201ENST00000513484 108 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 Y_RNA.705-201ENST00000516862 110 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 CYP3A52P-201ENST00000563326 91 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 MIR4713-201ENST00000582691 75 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 MIR4439-201ENST00000583746 80 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 U7.3-201ENST00000616123 62 ntBASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM56Q9BRZ2 ZNF658B-202ENST00000615961 3375 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 SNORD115-35-201ENST00000365122 82 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 RNU7-2P-201ENST00000516096 62 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 RNU6-917P-201ENST00000516294 104 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 DEFB122-202ENST00000569013 197 ntBASIC2.34□□□□□ -2.03
TRIM56Q9BRZ2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM56Q9BRZ2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 RNA5SP276-201ENST00000362580 94 ntBASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 SNORA3.2-201ENST00000408221 125 ntBASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 snoU13.26-201ENST00000459452 105 ntBASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 RNU7-35P-201ENST00000517174 62 ntBASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 MIR4287-201ENST00000579398 78 ntBASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 MIR8065-201ENST00000620577 100 ntBASIC2.33□□□□□ -2.04
TRIM56Q9BRZ2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TRIM56Q9BRZ2 RNA5SP173-201ENST00000364857 136 ntBASIC2.32□□□□□ -2.04
TRIM56Q9BRZ2 RNU6-972P-201ENST00000391208 107 ntBASIC2.32□□□□□ -2.04
TRIM56Q9BRZ2 RNU6-237P-201ENST00000515985 71 ntBASIC2.32□□□□□ -2.04
TRIM56Q9BRZ2 MIR4777-201ENST00000583710 86 ntBASIC2.32□□□□□ -2.04
TRIM56Q9BRZ2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRIM56Q9BRZ2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 RNU6-342P-201ENST00000384521 104 ntBASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 MIR513A1-201ENST00000385138 129 ntBASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 AL451046.2-201ENST00000403074 277 ntBASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 RNU6-887P-201ENST00000410660 100 ntBASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 RNU6-602P-201ENST00000411155 105 ntBASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 AP003327.1-201ENST00000529684 127 ntBASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 MIR4251-201ENST00000635819 61 ntBASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 AC091304.10-201ENST00000641554 121 ntBASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM56Q9BRZ2 MIR494-201ENST00000349529 81 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 SNORA16B-201ENST00000364674 135 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 MIR504-201ENST00000385065 83 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 RNU4-53P-201ENST00000410828 140 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 RNU6-162P-201ENST00000516228 103 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 MIR4769-201ENST00000584126 77 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 MIR548Z-201ENST00000584743 97 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
TRIM56Q9BRZ2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 Y_RNA.17-201ENST00000362433 111 ntBASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 SNORA6-201ENST00000384033 151 ntBASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 MIR206-201ENST00000384872 86 ntBASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 Y_RNA.593-201ENST00000410292 98 ntBASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 MIR4524B-201ENST00000581569 115 ntBASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 MIR3935-201ENST00000583472 104 ntBASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 AL357312.1-201ENST00000603879 298 ntBASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 MIR8074-201ENST00000615081 81 ntBASIC2.29□□□□□ -2.04
TRIM56Q9BRZ2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM56Q9BRZ2 SNORD38.1-201ENST00000363863 68 ntBASIC2.28□□□□□ -2.04
TRIM56Q9BRZ2 RNU6-1152P-201ENST00000384576 107 ntBASIC2.28□□□□□ -2.04
TRIM56Q9BRZ2 SNORD38B-201ENST00000384690 67 ntBASIC2.28□□□□□ -2.04
TRIM56Q9BRZ2 RNU2-40P-201ENST00000410833 196 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms