Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.4□□□□□ -2.35
FOXC2Q99958 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.4□□□□□ -2.35
FOXC2Q99958 RNU6-998P-201ENST00000515894 101 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 RNU6-1270P-201ENST00000517128 108 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 MIR6740-201ENST00000618268 113 ntBASIC0.4□□□□□ -2.35
FOXC2Q99958 Y_RNA.76-201ENST00000362931 109 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 Y_RNA.145-201ENST00000363527 102 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 Y_RNA.432-201ENST00000384087 111 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 SNORA1-201ENST00000384107 130 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 MIR606-201ENST00000384851 96 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 MIR1302-6-201ENST00000408466 90 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 RNU4-43P-201ENST00000410628 137 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 RNU6-1190P-201ENST00000410811 104 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 RNU7-56P-201ENST00000458744 62 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 RNU7-96P-201ENST00000459535 64 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 RNU6-561P-201ENST00000516222 102 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 RNU7-53P-201ENST00000516705 60 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 AL442663.2-201ENST00000554385 511 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 AC011195.1-201ENST00000578177 177 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 MIR4804-201ENST00000581683 73 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 AC006504.6-201ENST00000590142 199 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 AC020891.4-201ENST00000605745 93 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 Y_RNA.812-201ENST00000610788 101 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 Y_RNA.784-201ENST00000613803 101 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 Y_RNA.787-201ENST00000616522 101 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 Y_RNA.780-201ENST00000617336 101 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 Y_RNA.801-201ENST00000619005 101 ntBASIC0.39□□□□□ -2.35
FOXC2Q99958 Y_RNA.352-201ENST00000365439 102 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 Y_RNA.396-201ENST00000383949 103 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 Y_RNA.416-201ENST00000384014 113 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 Y_RNA.461-201ENST00000384263 103 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 SNORD38B-201ENST00000384690 67 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 Y_RNA.562-201ENST00000384695 113 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 RNU6-713P-201ENST00000384761 107 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 RNU6-1237P-201ENST00000384777 107 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 SNORD83.1-201ENST00000411362 77 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 MIR18B-201ENST00000454574 71 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 snoU13.2-201ENST00000459201 104 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 SNORD38B-202ENST00000625943 69 ntBASIC0.38□□□□□ -2.35
FOXC2Q99958 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.37□□□□□ -2.35
FOXC2Q99958 RNU6-1292P-201ENST00000383856 107 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 RNU6-1189P-201ENST00000383958 107 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 Y_RNA.542-201ENST00000384641 111 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 MIR573-201ENST00000384964 99 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 Y_RNA.590-201ENST00000410140 107 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 Y_RNA.622-201ENST00000411091 108 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 RNU7-62P-201ENST00000458856 62 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 SNORD127-201ENST00000458892 86 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
FOXC2Q99958 MIR4676-201ENST00000583078 72 ntBASIC0.37□□□□□ -2.35
FOXC2Q99958 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.36□□□□□ -2.35
FOXC2Q99958 MIR30D-201ENST00000362283 70 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 RNU6-238P-201ENST00000363313 106 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 RNY4P28-201ENST00000365281 93 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 MIR548I3-201ENST00000408378 149 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.36□□□□□ -2.35
FOXC2Q99958 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.36□□□□□ -2.35
FOXC2Q99958 AC015818.7-201ENST00000428754 109 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 AC087499.7-201ENST00000441958 109 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 RNU2-11P-201ENST00000459191 187 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 MIR5197-201ENST00000583721 112 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 AL365205.2-201ENST00000594586 68 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 AC008737.2-201ENST00000599446 118 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 AL442067.1-201ENST00000613261 223 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 MIR6717-201ENST00000622747 73 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 U6.104-201ENST00000637979 90 ntBASIC0.36□□□□□ -2.35
FOXC2Q99958 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
FOXC2Q99958 Y_RNA.47-201ENST00000362697 108 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 Y_RNA.133-201ENST00000363428 110 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 Y_RNA.176-201ENST00000363815 109 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 RNU6-978P-201ENST00000364371 103 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 Y_RNA.292-201ENST00000364904 97 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
FOXC2Q99958 SNORA36.2-201ENST00000384004 127 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 Y_RNA.430-201ENST00000384081 110 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 MIR588-201ENST00000384900 83 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 MIR568-201ENST00000385036 95 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 SNORD12C-201ENST00000386307 89 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 RNU6-1165P-201ENST00000410119 107 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 RNA5SP222-201ENST00000411039 105 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 AL138752.1-201ENST00000452964 351 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.35□□□□□ -2.35
FOXC2Q99958 MTND1P19-201ENST00000511780 315 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.35□□□□□ -2.35
FOXC2Q99958 MIR4771-2-201ENST00000577758 74 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 MIR4771-1-201ENST00000582617 74 ntBASIC0.35□□□□□ -2.35
FOXC2Q99958 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
FOXC2Q99958 MIR18A-201ENST00000362310 71 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 RNU6-103P-201ENST00000363686 107 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 RNU4-67P-201ENST00000364569 141 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 Y_RNA.262-201ENST00000364641 102 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 SNORA1.1-201ENST00000364671 133 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 RNU4-17P-201ENST00000365598 141 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 RNY1P8-201ENST00000383970 114 ntBASIC0.34□□□□□ -2.36
FOXC2Q99958 MIR520F-201ENST00000384824 87 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms