Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MIR4711-201ENST00000578274 70 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 uc_338.6-201ENST00000613544 171 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 U6.90-201ENST00000614007 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 U6.70-201ENST00000620287 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 AC243829.3-201ENST00000622177 108 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU4-17P-201ENST00000365598 141 ntBASIC0.54□□□□□ -2.32
PRPF39Q86UA1 RNA5SP261-201ENST00000410536 106 ntBASIC0.54□□□□□ -2.32
PRPF39Q86UA1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.54□□□□□ -2.32
PRPF39Q86UA1 RNU7-56P-201ENST00000458744 62 ntBASIC0.54□□□□□ -2.32
PRPF39Q86UA1 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
PRPF39Q86UA1 AL442663.2-201ENST00000554385 511 ntBASIC0.54□□□□□ -2.32
PRPF39Q86UA1 MIR8062-201ENST00000621515 85 ntBASIC0.54□□□□□ -2.32
PRPF39Q86UA1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PRPF39Q86UA1 MIR18A-201ENST00000362310 71 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.54-201ENST00000362766 105 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 RNU6-728P-201ENST00000365375 104 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.483-201ENST00000384380 101 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 SNORD12C-201ENST00000386307 89 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
PRPF39Q86UA1 RNA5SP193-201ENST00000410353 107 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 MIR3129-201ENST00000581095 76 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 AC097639.2-201ENST00000603159 172 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 AC010487.4-201ENST00000637027 61 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 AL589743.1-201ENST00000551932 2712 ntBASIC0.53□□□□□ -2.32
PRPF39Q86UA1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.416-201ENST00000384014 113 ntBASIC0.52□□□□□ -2.33
PRPF39Q86UA1 SNORA1-201ENST00000384107 130 ntBASIC0.52□□□□□ -2.33
PRPF39Q86UA1 MIR193B-201ENST00000384907 83 ntBASIC0.52□□□□□ -2.33
PRPF39Q86UA1 MIR125B2-201ENST00000385128 89 ntBASIC0.52□□□□□ -2.33
PRPF39Q86UA1 RNU7-185P-201ENST00000459215 60 ntBASIC0.52□□□□□ -2.33
PRPF39Q86UA1 RNU7-80P-201ENST00000459562 61 ntBASIC0.52□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.574-201ENST00000384766 95 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 MT-TF-201ENST00000387314 71 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 RNA5SP237-201ENST00000410414 113 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.51□□□□□ -2.33
PRPF39Q86UA1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.51□□□□□ -2.33
PRPF39Q86UA1 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 RNU7-70P-201ENST00000516941 66 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 RNU7-156P-201ENST00000517214 74 ntBASIC0.51□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 SNORA63-201ENST00000363450 132 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 MT-TW-201ENST00000387382 68 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 RNU6-679P-201ENST00000391003 106 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 RNU6-381P-201ENST00000391259 108 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 RNU7-102P-201ENST00000458948 62 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.5□□□□□ -2.33
PRPF39Q86UA1 MIR6717-201ENST00000622747 73 ntBASIC0.5□□□□□ -2.33
PRPF39Q86UA1 AL596211.1-201ENST00000569873 2277 ntBASIC0.49□□□□□ -2.33
PRPF39Q86UA1 RNU6-1160P-201ENST00000384546 104 ntBASIC0.49□□□□□ -2.33
PRPF39Q86UA1 SNORA20-201ENST00000384662 132 ntBASIC0.49□□□□□ -2.33
PRPF39Q86UA1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.49□□□□□ -2.33
PRPF39Q86UA1 RNU7-45P-201ENST00000459460 63 ntBASIC0.49□□□□□ -2.33
PRPF39Q86UA1 MIR1273G-201ENST00000577677 100 ntBASIC0.49□□□□□ -2.33
PRPF39Q86UA1 MIR4282-201ENST00000583613 67 ntBASIC0.49□□□□□ -2.33
PRPF39Q86UA1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
PRPF39Q86UA1 RNU6-103P-201ENST00000363686 107 ntBASIC0.48□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.48□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.618-201ENST00000410949 107 ntBASIC0.48□□□□□ -2.33
PRPF39Q86UA1 MIR3152-201ENST00000579801 74 ntBASIC0.48□□□□□ -2.33
PRPF39Q86UA1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.48□□□□□ -2.33
PRPF39Q86UA1 AC092634.7-201ENST00000621022 103 ntBASIC0.48□□□□□ -2.33
PRPF39Q86UA1 RNA5SP117-201ENST00000365294 118 ntBASIC0.47□□□□□ -2.33
PRPF39Q86UA1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.47□□□□□ -2.33
PRPF39Q86UA1 SEPT7P4-201ENST00000437076 306 ntBASIC0.47□□□□□ -2.33
PRPF39Q86UA1 AL121914.1-201ENST00000450188 156 ntBASIC0.47□□□□□ -2.33
PRPF39Q86UA1 RNU6-561P-201ENST00000516222 102 ntBASIC0.47□□□□□ -2.33
PRPF39Q86UA1 AC090897.1-201ENST00000580909 226 ntBASIC0.47□□□□□ -2.33
PRPF39Q86UA1 MIR5197-201ENST00000583721 112 ntBASIC0.47□□□□□ -2.33
PRPF39Q86UA1 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
PRPF39Q86UA1 AL442067.1-201ENST00000613261 223 ntBASIC0.47□□□□□ -2.33
PRPF39Q86UA1 Y_RNA.277-201ENST00000364754 102 ntBASIC0.46□□□□□ -2.34
PRPF39Q86UA1 MIR606-201ENST00000384851 96 ntBASIC0.46□□□□□ -2.34
PRPF39Q86UA1 MIR563-201ENST00000385080 79 ntBASIC0.46□□□□□ -2.34
PRPF39Q86UA1 SNORD93-201ENST00000408813 74 ntBASIC0.46□□□□□ -2.34
PRPF39Q86UA1 AC008737.2-201ENST00000599446 118 ntBASIC0.46□□□□□ -2.34
PRPF39Q86UA1 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
PRPF39Q86UA1 AC091932.4-201ENST00000623386 200 ntBASIC0.46□□□□□ -2.34
PRPF39Q86UA1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
PRPF39Q86UA1 RNU6-653P-201ENST00000363074 106 ntBASIC0.45□□□□□ -2.34
PRPF39Q86UA1 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
PRPF39Q86UA1 SNORD92-201ENST00000585078 85 ntBASIC0.45□□□□□ -2.34
PRPF39Q86UA1 MIR30D-201ENST00000362283 70 ntBASIC0.44□□□□□ -2.34
PRPF39Q86UA1 Y_RNA.326-201ENST00000365176 113 ntBASIC0.44□□□□□ -2.34
PRPF39Q86UA1 SNORA26.6-201ENST00000391256 115 ntBASIC0.44□□□□□ -2.34
PRPF39Q86UA1 SNORD100-201ENST00000408573 76 ntBASIC0.44□□□□□ -2.34
PRPF39Q86UA1 SNORD71-201ENST00000411292 86 ntBASIC0.44□□□□□ -2.34
PRPF39Q86UA1 SNORA25.12-201ENST00000516202 82 ntBASIC0.44□□□□□ -2.34
PRPF39Q86UA1 SNORD116-25-201ENST00000516517 92 ntBASIC0.44□□□□□ -2.34
PRPF39Q86UA1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
PRPF39Q86UA1 uc_338.16-201ENST00000621804 95 ntBASIC0.44□□□□□ -2.34
PRPF39Q86UA1 MIR376A2-201ENST00000636782 80 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms