Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.72□□□□□ -2.13
SLC44A4Q53GD3 MIR136-201ENST00000385207 82 ntBASIC1.72□□□□□ -2.13
SLC44A4Q53GD3 SNORD41-201ENST00000386967 70 ntBASIC1.72□□□□□ -2.13
SLC44A4Q53GD3 RNU7-80P-201ENST00000459562 61 ntBASIC1.72□□□□□ -2.13
SLC44A4Q53GD3 AC079140.2-201ENST00000506193 142 ntBASIC1.72□□□□□ -2.13
SLC44A4Q53GD3 AC007012.1-201ENST00000567192 175 ntBASIC1.72□□□□□ -2.13
SLC44A4Q53GD3 MIR3937-201ENST00000580135 106 ntBASIC1.72□□□□□ -2.13
SLC44A4Q53GD3 RNU1-42P-201ENST00000364033 160 ntBASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 RNU6-880P-201ENST00000384526 107 ntBASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 RNU6-1104P-201ENST00000384723 104 ntBASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 AC009474.2-201ENST00000451383 136 ntBASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 RNU7-45P-201ENST00000459460 63 ntBASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 AC090821.2-201ENST00000523552 176 ntBASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 AC022523.2-201ENST00000561045 150 ntBASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SLC44A4Q53GD3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 Y_RNA.43-201ENST00000362670 111 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 RNU6-1255P-201ENST00000363434 112 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 Y_RNA.298-201ENST00000364960 107 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 MIR570-201ENST00000384917 97 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 MIR489-201ENST00000384923 84 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 MIR653-201ENST00000385279 96 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 SNORD28B-201ENST00000390993 75 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 RNA5SP89-201ENST00000410300 108 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 RNU2-11P-201ENST00000459191 187 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 RNU7-164P-201ENST00000459221 62 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 RPS29P24-201ENST00000486345 171 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 COX6CP6-201ENST00000490840 228 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 RNU6-998P-201ENST00000515894 101 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 RNU7-123P-201ENST00000515911 60 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 RNU2-35P-201ENST00000516446 142 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 MIR548AR-201ENST00000582191 57 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 AL645939.4-201ENST00000604495 135 ntBASIC1.7□□□□□ -2.14
SLC44A4Q53GD3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-34-201ENST00000362441 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-12-201ENST00000362583 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-29-201ENST00000362834 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-9-201ENST00000362912 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-21-201ENST00000362963 81 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-14-201ENST00000363090 81 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-13-201ENST00000363358 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-41-201ENST00000363608 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-11-201ENST00000363616 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-5-201ENST00000363633 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-39-201ENST00000363694 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-4-201ENST00000363810 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-16-201ENST00000363887 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-6-201ENST00000363942 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-42-201ENST00000364273 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 RNU6-60P-201ENST00000364792 103 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-15-201ENST00000364809 81 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-1-201ENST00000364961 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-26-201ENST00000365067 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-10-201ENST00000365073 81 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-43-201ENST00000365503 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-36-201ENST00000365629 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 AL451046.2-201ENST00000403074 277 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 RPS27P16-201ENST00000425758 201 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 AC027119.1-201ENST00000440877 241 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD123-201ENST00000459473 70 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 RNU6-958P-201ENST00000516995 106 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 RNA5SP170-201ENST00000517150 101 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 MIR4305-201ENST00000583252 102 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 SNORD115-40-201ENST00000606510 82 ntBASIC1.69□□□□□ -2.14
SLC44A4Q53GD3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.68□□□□□ -2.14
SLC44A4Q53GD3 MIR302B-201ENST00000362188 73 ntBASIC1.68□□□□□ -2.14
SLC44A4Q53GD3 Y_RNA.198-201ENST00000364013 98 ntBASIC1.68□□□□□ -2.14
SLC44A4Q53GD3 RNU6-392P-201ENST00000364926 101 ntBASIC1.68□□□□□ -2.14
SLC44A4Q53GD3 MIR1276-201ENST00000408707 83 ntBASIC1.68□□□□□ -2.14
SLC44A4Q53GD3 AL035470.1-201ENST00000622571 220 ntBASIC1.68□□□□□ -2.14
SLC44A4Q53GD3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC44A4Q53GD3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 MIR450A1-201ENST00000362262 91 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 SNORA63.5-201ENST00000363548 123 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 SNORD12C-201ENST00000386307 89 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 AL035398.1-201ENST00000430869 322 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 RNU7-67P-201ENST00000459003 62 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 RNU7-96P-201ENST00000459535 64 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 RNU6-322P-201ENST00000516010 103 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 MIR4679-2-201ENST00000578358 77 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 uc_338.28-201ENST00000612082 187 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.67□□□□□ -2.14
SLC44A4Q53GD3 RNU6-1107P-201ENST00000364817 104 ntBASIC1.66□□□□□ -2.14
SLC44A4Q53GD3 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
SLC44A4Q53GD3 AL512326.2-201ENST00000426359 151 ntBASIC1.66□□□□□ -2.14
SLC44A4Q53GD3 AC107297.1-201ENST00000459991 176 ntBASIC1.66□□□□□ -2.14
SLC44A4Q53GD3 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
SLC44A4Q53GD3 MIR6504-201ENST00000613520 61 ntBASIC1.66□□□□□ -2.14
SLC44A4Q53GD3 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 SNORA1.2-201ENST00000365189 134 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 RNU6-106P-201ENST00000384405 107 ntBASIC1.65□□□□□ -2.15
SLC44A4Q53GD3 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 544.9 ms