Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 RNU7-43P-201ENST00000516554 64 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 RNU7-53P-201ENST00000516705 60 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 AC004812.1-201ENST00000540773 146 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 AC008133.2-201ENST00000624540 351 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.213-201ENST00000364178 111 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 SNORA26.9-201ENST00000391322 122 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 MIR934-201ENST00000401241 83 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 HMGN1P33-201ENST00000432945 451 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 RNU7-41P-201ENST00000515917 61 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 MIR4679-2-201ENST00000578358 77 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 MIR8055-201ENST00000610739 97 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 MIR6717-201ENST00000622747 73 ntBASIC1.32□□□□□ -2.2
ERVFC1-1P60608 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.32□□□□□ -2.2
ERVFC1-1P60608 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.85-201ENST00000363014 111 ntBASIC1.31□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.362-201ENST00000365518 110 ntBASIC1.31□□□□□ -2.2
ERVFC1-1P60608 SNORA51.10-201ENST00000384418 136 ntBASIC1.31□□□□□ -2.2
ERVFC1-1P60608 MIR520C-201ENST00000385005 87 ntBASIC1.31□□□□□ -2.2
ERVFC1-1P60608 SNORD12C-201ENST00000386307 89 ntBASIC1.31□□□□□ -2.2
ERVFC1-1P60608 MIR764-201ENST00000390811 85 ntBASIC1.31□□□□□ -2.2
ERVFC1-1P60608 AL022718.1-201ENST00000412004 84 ntBASIC1.31□□□□□ -2.2
ERVFC1-1P60608 MIR8074-201ENST00000615081 81 ntBASIC1.31□□□□□ -2.2
ERVFC1-1P60608 SNORA22.1-201ENST00000362701 134 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 RNY4P6-201ENST00000363667 96 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 RNU6-1107P-201ENST00000364817 104 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.344-201ENST00000365381 112 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 RNU6-147P-201ENST00000383983 107 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.430-201ENST00000384081 110 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.470-201ENST00000384307 117 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.531-201ENST00000384589 121 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 U8.13-201ENST00000390842 128 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 AL451046.2-201ENST00000403074 277 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 snoU13.16-201ENST00000459350 104 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 RNU6-322P-201ENST00000516010 103 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 RNU6-922P-201ENST00000516753 99 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 RNU6-250P-201ENST00000516958 103 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 MIR548AO-201ENST00000579992 96 ntBASIC1.3□□□□□ -2.2
ERVFC1-1P60608 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.3□□□□□ -2.2
ERVFC1-1P60608 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
ERVFC1-1P60608 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 SNORA63.5-201ENST00000363548 123 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 RNA5SP99-201ENST00000364020 114 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 RNU6-106P-201ENST00000384405 107 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 RNU6-1067P-201ENST00000384752 107 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 MIR548D2-201ENST00000384955 97 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 MIR30A-201ENST00000385092 71 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 MIR3198-2-201ENST00000577868 80 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 MIR3152-201ENST00000579801 74 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 MIR3192-201ENST00000584920 77 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 uc_338.28-201ENST00000612082 187 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 MIR6845-201ENST00000613182 61 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 AC087741.2-201ENST00000619415 172 ntBASIC1.29□□□□□ -2.2
ERVFC1-1P60608 SNORD115-2-201ENST00000362842 82 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.116-201ENST00000363292 103 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 SNORD115-20-201ENST00000365099 82 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 SNORA40.18-201ENST00000391200 128 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 AC090844.1-201ENST00000422019 156 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 RNU7-113P-201ENST00000459273 62 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 MIR1270-201ENST00000459320 83 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 RNU6-412P-201ENST00000516434 106 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 MIR3613-201ENST00000579844 87 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 MIR3163-201ENST00000581592 73 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 AL513534.2-201ENST00000603836 250 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 AL096861.1-201ENST00000610899 123 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 MIR4251-201ENST00000635819 61 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 Z97988.1-201ENST00000637697 135 ntBASIC1.28□□□□□ -2.2
ERVFC1-1P60608 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
ERVFC1-1P60608 MIR759-201ENST00000390224 91 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 RNU6-554P-201ENST00000410466 106 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 RNA5SP261-201ENST00000410536 106 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 AC023790.1-201ENST00000482174 347 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 AC113410.1-201ENST00000505029 247 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 SNORA25.15-201ENST00000516487 89 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 RNU7-6P-201ENST00000516845 62 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 SNORA44.1-201ENST00000517031 108 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 MIR548AE2-201ENST00000583456 67 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
ERVFC1-1P60608 AL589743.1-201ENST00000551932 2712 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 AP000648.3-201ENST00000623539 4507 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 MIR450A1-201ENST00000362262 91 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 Y_RNA.140-201ENST00000363474 103 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 SNORA1.1-201ENST00000364671 133 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 Y_RNA.323-201ENST00000365157 109 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 RNU6-602P-201ENST00000411155 105 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 RPS3AP1-201ENST00000413190 320 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms