Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 MIR302B-201ENST00000362188 73 ntBASIC1.63□□□□□ -2.15
RHOP08100 MIR342-201ENST00000362212 99 ntBASIC1.63□□□□□ -2.15
RHOP08100 RNU6-215P-201ENST00000365169 102 ntBASIC1.63□□□□□ -2.15
RHOP08100 AC021443.1-201ENST00000604478 211 ntBASIC1.63□□□□□ -2.15
RHOP08100 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
RHOP08100 MIR7111-201ENST00000619751 72 ntBASIC1.63□□□□□ -2.15
RHOP08100 AC021613.1-201ENST00000623880 111 ntBASIC1.63□□□□□ -2.15
RHOP08100 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
RHOP08100 MTND5P18-201ENST00000445624 1801 ntBASIC1.62□□□□□ -2.15
RHOP08100 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RHOP08100 Y_RNA.298-201ENST00000364960 107 ntBASIC1.62□□□□□ -2.15
RHOP08100 SNORA25.9-201ENST00000365087 128 ntBASIC1.62□□□□□ -2.15
RHOP08100 SNORA51.10-201ENST00000384418 136 ntBASIC1.62□□□□□ -2.15
RHOP08100 MIR499A-201ENST00000384903 122 ntBASIC1.62□□□□□ -2.15
RHOP08100 MIR517C-201ENST00000385103 95 ntBASIC1.62□□□□□ -2.15
RHOP08100 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
RHOP08100 RNU7-67P-201ENST00000459003 62 ntBASIC1.62□□□□□ -2.15
RHOP08100 RNY4P20-201ENST00000516678 93 ntBASIC1.62□□□□□ -2.15
RHOP08100 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
RHOP08100 MIR4305-201ENST00000583252 102 ntBASIC1.62□□□□□ -2.15
RHOP08100 AL670379.3-201ENST00000605040 251 ntBASIC1.62□□□□□ -2.15
RHOP08100 AL020996.3-201ENST00000606617 222 ntBASIC1.62□□□□□ -2.15
RHOP08100 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RHOP08100 MIR520C-201ENST00000385005 87 ntBASIC1.61□□□□□ -2.15
RHOP08100 RNU6-1319P-201ENST00000390855 104 ntBASIC1.61□□□□□ -2.15
RHOP08100 RNU6-747P-201ENST00000390928 104 ntBASIC1.61□□□□□ -2.15
RHOP08100 RNU6-241P-201ENST00000391148 104 ntBASIC1.61□□□□□ -2.15
RHOP08100 SNORA26.6-201ENST00000391256 115 ntBASIC1.61□□□□□ -2.15
RHOP08100 MIR1263-201ENST00000408324 86 ntBASIC1.61□□□□□ -2.15
RHOP08100 RNA5SP261-201ENST00000410536 106 ntBASIC1.61□□□□□ -2.15
RHOP08100 RNA5SP144-201ENST00000410846 116 ntBASIC1.61□□□□□ -2.15
RHOP08100 RNU6-177P-201ENST00000411257 104 ntBASIC1.61□□□□□ -2.15
RHOP08100 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.61□□□□□ -2.15
RHOP08100 snoU13.9-201ENST00000458927 103 ntBASIC1.61□□□□□ -2.15
RHOP08100 snoU13.16-201ENST00000459350 104 ntBASIC1.61□□□□□ -2.15
RHOP08100 RNU6-958P-201ENST00000516995 106 ntBASIC1.61□□□□□ -2.15
RHOP08100 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
RHOP08100 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.61□□□□□ -2.15
RHOP08100 MIR6841-201ENST00000637129 72 ntBASIC1.61□□□□□ -2.15
RHOP08100 RNU4-16P-201ENST00000364737 141 ntBASIC1.6□□□□□ -2.15
RHOP08100 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
RHOP08100 Y_RNA.430-201ENST00000384081 110 ntBASIC1.6□□□□□ -2.15
RHOP08100 Y_RNA.528-201ENST00000384575 108 ntBASIC1.6□□□□□ -2.15
RHOP08100 MIR570-201ENST00000384917 97 ntBASIC1.6□□□□□ -2.15
RHOP08100 RNU6-913P-201ENST00000390913 95 ntBASIC1.6□□□□□ -2.15
RHOP08100 RNU7-123P-201ENST00000515911 60 ntBASIC1.6□□□□□ -2.15
RHOP08100 SNORD111.1-201ENST00000516421 86 ntBASIC1.6□□□□□ -2.15
RHOP08100 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
RHOP08100 HSPE1P19-201ENST00000603327 295 ntBASIC1.6□□□□□ -2.15
RHOP08100 ZNF209P-201ENST00000593450 2304 ntBASIC1.59□□□□□ -2.15
RHOP08100 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
RHOP08100 RNA5SP48-201ENST00000363969 126 ntBASIC1.59□□□□□ -2.15
RHOP08100 Y_RNA.198-201ENST00000364013 98 ntBASIC1.59□□□□□ -2.15
RHOP08100 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.59□□□□□ -2.15
RHOP08100 RNU6-893P-201ENST00000458841 100 ntBASIC1.59□□□□□ -2.15
RHOP08100 RNU7-164P-201ENST00000459221 62 ntBASIC1.59□□□□□ -2.15
RHOP08100 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.59□□□□□ -2.15
RHOP08100 AC005908.1-201ENST00000468701 347 ntBASIC1.59□□□□□ -2.15
RHOP08100 RNU2-35P-201ENST00000516446 142 ntBASIC1.59□□□□□ -2.15
RHOP08100 RNU6-922P-201ENST00000516753 99 ntBASIC1.59□□□□□ -2.15
RHOP08100 RNU1-92P-201ENST00000517017 135 ntBASIC1.59□□□□□ -2.15
RHOP08100 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
RHOP08100 GHRLOS.1-201ENST00000610995 70 ntBASIC1.59□□□□□ -2.15
RHOP08100 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.59□□□□□ -2.15
RHOP08100 SNORD33-201ENST00000362761 85 ntBASIC1.58□□□□□ -2.16
RHOP08100 Y_RNA.118-201ENST00000363300 101 ntBASIC1.58□□□□□ -2.16
RHOP08100 RNU6-1325P-201ENST00000364905 105 ntBASIC1.58□□□□□ -2.16
RHOP08100 Y_RNA.508-201ENST00000384502 114 ntBASIC1.58□□□□□ -2.16
RHOP08100 SNORD20-201ENST00000384550 80 ntBASIC1.58□□□□□ -2.16
RHOP08100 RNU6-429P-201ENST00000384582 108 ntBASIC1.58□□□□□ -2.16
RHOP08100 MIR548A3-201ENST00000385297 97 ntBASIC1.58□□□□□ -2.16
RHOP08100 POLR2J4-204ENST00000418424 324 ntBASIC1.58□□□□□ -2.16
RHOP08100 RNU6-919P-201ENST00000516731 104 ntBASIC1.58□□□□□ -2.16
RHOP08100 MIR4421-201ENST00000578133 69 ntBASIC1.58□□□□□ -2.16
RHOP08100 MIR3152-201ENST00000579801 74 ntBASIC1.58□□□□□ -2.16
RHOP08100 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
RHOP08100 MIR8055-201ENST00000610739 97 ntBASIC1.58□□□□□ -2.16
RHOP08100 AL121890.5-201ENST00000620848 304 ntBASIC1.58□□□□□ -2.16
RHOP08100 MIR6717-201ENST00000622747 73 ntBASIC1.58□□□□□ -2.16
RHOP08100 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
RHOP08100 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
RHOP08100 Y_RNA.213-201ENST00000364178 111 ntBASIC1.57□□□□□ -2.16
RHOP08100 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.57□□□□□ -2.16
RHOP08100 Y_RNA.649-201ENST00000459077 103 ntBASIC1.57□□□□□ -2.16
RHOP08100 RNU7-45P-201ENST00000459460 63 ntBASIC1.57□□□□□ -2.16
RHOP08100 RNU7-41P-201ENST00000515917 61 ntBASIC1.57□□□□□ -2.16
RHOP08100 RNU6-589P-201ENST00000516485 107 ntBASIC1.57□□□□□ -2.16
RHOP08100 MTND5P34-201ENST00000568888 325 ntBASIC1.57□□□□□ -2.16
RHOP08100 MIR4251-201ENST00000635819 61 ntBASIC1.57□□□□□ -2.16
RHOP08100 Z97988.1-201ENST00000637697 135 ntBASIC1.57□□□□□ -2.16
RHOP08100 RNU6-392P-201ENST00000364926 101 ntBASIC1.56□□□□□ -2.16
RHOP08100 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
RHOP08100 RNU6-880P-201ENST00000384526 107 ntBASIC1.56□□□□□ -2.16
RHOP08100 RNU6-1190P-201ENST00000410811 104 ntBASIC1.56□□□□□ -2.16
RHOP08100 AL022718.1-201ENST00000412004 84 ntBASIC1.56□□□□□ -2.16
RHOP08100 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
RHOP08100 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
RHOP08100 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.56□□□□□ -2.16
RHOP08100 MIR6129-201ENST00000616087 109 ntBASIC1.56□□□□□ -2.16
RHOP08100 MIR8063-201ENST00000621930 81 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 276.8 ms