Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 SNORD71-201ENST00000411292 86 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNU6-785P-201ENST00000411324 104 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNU6-976P-201ENST00000516086 111 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNU6-135P-201ENST00000516769 101 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNU6-365P-201ENST00000517113 106 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 AC141557.1-201ENST00000540982 400 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 AL442663.2-201ENST00000554385 511 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 U6.90-201ENST00000614007 104 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 U6.70-201ENST00000620287 104 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 MTND1P7-201ENST00000632801 297 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNU6-1099P-201ENST00000363533 107 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNU6-1205P-201ENST00000363625 106 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 Y_RNA.486-201ENST00000384398 107 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNU6-1064P-201ENST00000410626 104 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 AC108740.1-201ENST00000498629 225 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNA5SP153-201ENST00000516498 76 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 AC090897.1-201ENST00000580909 226 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 C8orf59P2-201ENST00000603441 271 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 AL133255.1-201ENST00000606374 441 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 U4.2-201ENST00000618561 85 ntBASIC0.1□□□□□ -2.39
COL6A6A6NMZ7 RNU6-1115P-201ENST00000362490 106 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 SNORA63C-201ENST00000364578 129 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 RNU6-985P-201ENST00000410182 104 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 AC087499.4-201ENST00000448505 178 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 AC082651.2-201ENST00000496833 166 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 AC074198.2-201ENST00000508153 258 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 SNORA27.4-201ENST00000516650 95 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 SNORA40.15-201ENST00000516884 107 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 MIR4771-2-201ENST00000577758 74 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 MIR4771-1-201ENST00000582617 74 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 MIR4795-201ENST00000584182 89 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 MIR371B-201ENST00000638082 66 ntBASIC0.09□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.16-201ENST00000362421 102 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.84-201ENST00000363011 104 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.275-201ENST00000364726 110 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNY3P5-201ENST00000384127 102 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 SNORA40.8-201ENST00000411034 126 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 SNRPGP8-201ENST00000454064 226 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNY1P9-201ENST00000532431 109 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.37-201ENST00000362606 108 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 SNORD113-8-201ENST00000363497 74 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.229-201ENST00000364347 113 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNA5SP205-201ENST00000364653 136 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNU6-450P-201ENST00000364654 107 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNU6-702P-201ENST00000364982 107 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNU6-290P-201ENST00000365212 101 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.362-201ENST00000365518 110 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNU7-80P-201ENST00000459562 61 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 AC010655.3-201ENST00000478818 450 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNA5SP134-201ENST00000516492 96 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 RNU2-31P-201ENST00000516954 155 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 MIR378F-201ENST00000578143 78 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.08□□□□□ -2.4
COL6A6A6NMZ7 MIR335-201ENST00000362173 94 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.24-201ENST00000362508 103 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.183-201ENST00000363882 113 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 SNORA20-201ENST00000384662 132 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 MIR518F-201ENST00000384973 87 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.579-201ENST00000390939 94 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.590-201ENST00000410140 107 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.604-201ENST00000410574 102 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 RNU6-383P-201ENST00000410864 94 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 SNORA68.3-201ENST00000515906 83 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 MIR4491-201ENST00000581087 68 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 MIR4639-201ENST00000584938 69 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 AP001282.2-201ENST00000616149 309 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 AC244669.1-204ENST00000621564 178 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 SNORD45.3-201ENST00000363836 72 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.395-201ENST00000383945 109 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 RNU6-708P-201ENST00000384217 107 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 RNU6-310P-201ENST00000384655 107 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 MTATP6P23-201ENST00000440153 476 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 RNU6-893P-201ENST00000458841 100 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.660-201ENST00000516002 120 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 IGKV1-22-201ENST00000524313 326 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 MIR6717-201ENST00000622747 73 ntBASIC0.07□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.23-201ENST00000362496 106 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.66-201ENST00000362862 102 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.91-201ENST00000363042 107 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1082P-201ENST00000364574 107 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.394-201ENST00000383942 103 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-926P-201ENST00000384075 107 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-937P-201ENST00000384325 106 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-679P-201ENST00000391003 106 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 MIR1252-201ENST00000408861 65 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 SEPT7P4-201ENST00000437076 306 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 256.5 ms