Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RPS29P30-201ENST00000600975 111 ntBASIC-0.44□□□□□ -2.48
TRAV41A0A0B4J266 AC113139.1-201ENST00000605049 239 ntBASIC-0.44□□□□□ -2.48
TRAV41A0A0B4J266 uc_338.28-201ENST00000612082 187 ntBASIC-0.44□□□□□ -2.48
TRAV41A0A0B4J266 AC084781.2-201ENST00000615568 161 ntBASIC-0.44□□□□□ -2.48
TRAV41A0A0B4J266 AC091932.4-201ENST00000623386 200 ntBASIC-0.44□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 SNORD114-31-201ENST00000363219 75 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 RNU6-702P-201ENST00000364982 107 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 RNU6-484P-201ENST00000384016 107 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 SNORA1-201ENST00000384107 130 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 SNORA18-201ENST00000384416 132 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 RPL21P38-201ENST00000418090 167 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 PMCHL1-202ENST00000423102 261 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 RNU6-320P-201ENST00000516511 106 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 AC133104.2-201ENST00000615272 193 ntBASIC-0.45□□□□□ -2.48
TRAV41A0A0B4J266 SNORD113-8-201ENST00000363497 74 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 RNU6-923P-201ENST00000364753 107 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 RNY4P36-201ENST00000391116 96 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 RNA5SP300-201ENST00000391197 107 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 SNORA40.14-201ENST00000516543 86 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 RNU6-126P-201ENST00000516685 103 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 AC138749.4-201ENST00000563970 127 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 MIR378D2-201ENST00000580636 98 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 MIR3666-201ENST00000607845 111 ntBASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.46□□□□□ -2.48
TRAV41A0A0B4J266 SNORA22.1-201ENST00000362701 134 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 RNU6-623P-201ENST00000363143 105 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 MIR526A2-201ENST00000390198 65 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 SNORA75.1-201ENST00000391130 148 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 MIR548L-201ENST00000408303 86 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 AC244505.6-201ENST00000452829 130 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 CR383656.4-201ENST00000546909 122 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 U7.6-201ENST00000610841 64 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 AC092794.1-201ENST00000612734 582 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 AC025253.1-201ENST00000613623 543 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 AC007485.1-201ENST00000616755 206 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 AL606534.2-204ENST00000635008 178 ntBASIC-0.47□□□□□ -2.48
TRAV41A0A0B4J266 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 SNORD49B-201ENST00000365172 72 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 HMGN2P22-201ENST00000427588 175 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 RNU7-104P-201ENST00000459398 79 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 RNU6-507P-201ENST00000516045 100 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 DEFB131E-201ENST00000532329 154 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 MIR4645-201ENST00000583158 77 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 MIR5197-201ENST00000583721 112 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 AC097639.2-201ENST00000603159 172 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 AL360085.1-201ENST00000604713 532 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 AL008718.3-201ENST00000610217 321 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 MTND5P32-201ENST00000560711 1802 ntBASIC-0.48□□□□□ -2.49
TRAV41A0A0B4J266 MIR148A-201ENST00000362215 68 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 RNA5SP133-201ENST00000363368 119 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 MIR876-201ENST00000401147 81 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 SNORA20.3-201ENST00000516880 132 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 AC006157.1-201ENST00000611750 366 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 AC021613.1-201ENST00000623880 111 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 AC073869.6-201ENST00000640656 341 ntBASIC-0.49□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 RNU4-58P-201ENST00000363192 141 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 RNA5SP403-201ENST00000363598 108 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 RNU6-662P-201ENST00000384253 104 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 SNORA20-201ENST00000384662 132 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 SNORD116-4-201ENST00000384733 96 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 SNORD41.1-201ENST00000391000 69 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 RNU7-80P-201ENST00000459562 61 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 RNU6-277P-201ENST00000516272 106 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 AC040926.1-201ENST00000530195 238 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 MIR3129-201ENST00000581095 76 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 AL138825.1-201ENST00000618587 192 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 U6.109-201ENST00000636749 87 ntBASIC-0.5□□□□□ -2.49
TRAV41A0A0B4J266 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms