Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MIR194-1-201ENST00000384892 85 ntBASIC2.33□□□□□ -2.04
SSU72Q9NP77 snoU13.16-201ENST00000459350 104 ntBASIC2.33□□□□□ -2.04
SSU72Q9NP77 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
SSU72Q9NP77 MIR8065-201ENST00000620577 100 ntBASIC2.33□□□□□ -2.04
SSU72Q9NP77 U1.36-201ENST00000620684 176 ntBASIC2.33□□□□□ -2.04
SSU72Q9NP77 MIR494-201ENST00000349529 81 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 Y_RNA.17-201ENST00000362433 111 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 RNU6-1313P-201ENST00000362622 102 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 RNU6-820P-201ENST00000384273 107 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 RNU6-360P-201ENST00000390944 104 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 SNORD77B-201ENST00000391112 67 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 BTF3P4-201ENST00000418852 495 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 UBL5P1-201ENST00000507979 193 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 MIR5007-201ENST00000583098 95 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 ELOCP29-201ENST00000588193 334 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 MIR6766-201ENST00000622641 72 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 MIR1245B-201ENST00000636115 69 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 Z97988.1-201ENST00000637697 135 ntBASIC2.32□□□□□ -2.04
SSU72Q9NP77 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSU72Q9NP77 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSU72Q9NP77 Y_RNA.95-201ENST00000363079 95 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 Y_RNA.247-201ENST00000364500 92 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 SNORA1.1-201ENST00000364671 133 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 SNORD115-35-201ENST00000365122 82 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 RNU6-1134P-201ENST00000365156 101 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 RNU6-1275P-201ENST00000391087 107 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 SNORD109B-201ENST00000458961 67 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 SNORD109A-201ENST00000459128 67 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 RNU7-35P-201ENST00000517174 62 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.31□□□□□ -2.04
SSU72Q9NP77 AC022254.1-201ENST00000567857 235 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 SCARNA4.1-201ENST00000628597 123 ntBASIC2.31□□□□□ -2.04
SSU72Q9NP77 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SSU72Q9NP77 Y_RNA.467-201ENST00000384297 102 ntBASIC2.3□□□□□ -2.04
SSU72Q9NP77 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
SSU72Q9NP77 AC090844.1-201ENST00000422019 156 ntBASIC2.3□□□□□ -2.04
SSU72Q9NP77 RNU6-1006P-201ENST00000516998 103 ntBASIC2.3□□□□□ -2.04
SSU72Q9NP77 MIR4764-201ENST00000580680 88 ntBASIC2.3□□□□□ -2.04
SSU72Q9NP77 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSU72Q9NP77 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.3□□□□□ -2.04
SSU72Q9NP77 Y_RNA.190-201ENST00000363964 101 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 SNORA18-201ENST00000384416 132 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 AL451046.2-201ENST00000403074 277 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 RNU6-602P-201ENST00000411155 105 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 AL161935.2-201ENST00000414627 60 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 RN7SKP132-201ENST00000516001 208 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 RNU7-43P-201ENST00000516554 64 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 MIR4446-201ENST00000578505 67 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 AC008133.2-201ENST00000624540 351 ntBASIC2.29□□□□□ -2.04
SSU72Q9NP77 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.28□□□□□ -2.04
SSU72Q9NP77 RNU6-1123P-201ENST00000362347 106 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 SNORD45B-201ENST00000364617 72 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 MIR634-201ENST00000385208 97 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 MIR653-201ENST00000385279 96 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 NDUFB4P4-201ENST00000404822 243 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 AC090255.1-201ENST00000495779 349 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 RNU7-2P-201ENST00000516096 62 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 MIR548AO-201ENST00000579992 96 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 MIR3200-201ENST00000580767 85 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 AL512310.12-203ENST00000640543 90 ntBASIC2.28□□□□□ -2.04
SSU72Q9NP77 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
SSU72Q9NP77 RNU6-1067P-201ENST00000384752 107 ntBASIC2.27□□□□□ -2.05
SSU72Q9NP77 AC004965.1-201ENST00000413033 213 ntBASIC2.27□□□□□ -2.05
SSU72Q9NP77 MRPL35P3-201ENST00000421557 364 ntBASIC2.27□□□□□ -2.05
SSU72Q9NP77 AC245047.7-201ENST00000440265 293 ntBASIC2.27□□□□□ -2.05
SSU72Q9NP77 AC108729.3-201ENST00000513484 108 ntBASIC2.27□□□□□ -2.05
SSU72Q9NP77 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SSU72Q9NP77 MIR206-201ENST00000384872 86 ntBASIC2.26□□□□□ -2.05
SSU72Q9NP77 AC019129.1-201ENST00000403786 261 ntBASIC2.26□□□□□ -2.05
SSU72Q9NP77 Y_RNA.659-201ENST00000515994 113 ntBASIC2.26□□□□□ -2.05
SSU72Q9NP77 RNU2-19P-201ENST00000517288 84 ntBASIC2.26□□□□□ -2.05
SSU72Q9NP77 AP003327.1-201ENST00000529684 127 ntBASIC2.26□□□□□ -2.05
SSU72Q9NP77 MIR376B-201ENST00000614515 100 ntBASIC2.26□□□□□ -2.05
SSU72Q9NP77 MIR520C-201ENST00000385005 87 ntBASIC2.25□□□□□ -2.05
SSU72Q9NP77 RNU2-40P-201ENST00000410833 196 ntBASIC2.25□□□□□ -2.05
SSU72Q9NP77 AC109327.2-201ENST00000448339 378 ntBASIC2.25□□□□□ -2.05
SSU72Q9NP77 RNU7-41P-201ENST00000515917 61 ntBASIC2.25□□□□□ -2.05
SSU72Q9NP77 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
SSU72Q9NP77 MIR4529-201ENST00000578110 78 ntBASIC2.25□□□□□ -2.05
SSU72Q9NP77 AP000553.5-201ENST00000641933 54 ntBASIC2.25□□□□□ -2.05
SSU72Q9NP77 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.24□□□□□ -2.05
SSU72Q9NP77 Y_RNA.140-201ENST00000363474 103 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 RNU6-301P-201ENST00000384277 107 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 SNORA48.3-201ENST00000391081 134 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 AL023284.1-201ENST00000403956 276 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 AC055731.1-201ENST00000474387 401 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 RNA5SP24-201ENST00000516478 95 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 SNORD67.1-201ENST00000516618 108 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.24□□□□□ -2.05
SSU72Q9NP77 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.24□□□□□ -2.05
SSU72Q9NP77 RNU6-1163P-201ENST00000364516 107 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 MIR34C-201ENST00000384831 77 ntBASIC2.23□□□□□ -2.05
SSU72Q9NP77 RNU6-887P-201ENST00000410660 100 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms