Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU4-17P-201ENST00000365598 141 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 RNY3P5-201ENST00000384127 102 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 MIR520E-201ENST00000384867 87 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 MIR1287-201ENST00000408492 90 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 RNA5SP247-201ENST00000411181 105 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 RNU7-73P-201ENST00000458743 63 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 SNORD127-201ENST00000458892 86 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-327P-201ENST00000516270 127 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 RNA5SP153-201ENST00000516498 76 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 AL078603.1-201ENST00000603824 313 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 MIR8055-201ENST00000610739 97 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 MIR376A2-201ENST00000636782 80 ntBASIC0.65□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.65-201ENST00000362846 100 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.226-201ENST00000364337 114 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 SNORA1.1-201ENST00000364671 133 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 RNU1-93P-201ENST00000364704 169 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.308-201ENST00000365043 101 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 SNORD77.3-201ENST00000391113 65 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 MTND2P23-201ENST00000422990 651 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 RNU7-45P-201ENST00000459460 63 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 RPS29P1-201ENST00000465274 159 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-977P-201ENST00000516411 103 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 AL442067.1-201ENST00000613261 223 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 MIR6740-201ENST00000618268 113 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 AC010332.2-201ENST00000613083 1904 ntBASIC0.64□□□□□ -2.31
VIPAS39Q9H9C1 MIR377-201ENST00000362145 69 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-728P-201ENST00000365375 104 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 MIR520F-201ENST00000384824 87 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 MIR568-201ENST00000385036 95 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 RNU1-119P-201ENST00000391122 165 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-493P-201ENST00000391321 108 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 MIR548I3-201ENST00000408378 149 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-602P-201ENST00000411155 105 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 MIR6767-201ENST00000637302 66 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 Z97988.1-201ENST00000637697 135 ntBASIC0.63□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 MIR588-201ENST00000384900 83 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 MIR520H-201ENST00000385126 88 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 SNORD12C-201ENST00000386307 89 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 SNORA79-201ENST00000408376 140 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 AL121914.1-201ENST00000450188 156 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 RNU7-96P-201ENST00000459535 64 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-998P-201ENST00000515894 101 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 AC011921.3-201ENST00000605540 361 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 AC020891.4-201ENST00000605745 93 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 RMST_2.1-201ENST00000617263 136 ntBASIC0.62□□□□□ -2.31
VIPAS39Q9H9C1 MIR302B-201ENST00000362188 73 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 MIR373-201ENST00000362273 69 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-923P-201ENST00000364753 107 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 SEPT7P4-201ENST00000437076 306 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 SCARNA15.1-201ENST00000516384 125 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 AC097639.2-201ENST00000603159 172 ntBASIC0.61□□□□□ -2.31
VIPAS39Q9H9C1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
VIPAS39Q9H9C1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.6□□□□□ -2.31
VIPAS39Q9H9C1 MIR4676-201ENST00000583078 72 ntBASIC0.6□□□□□ -2.31
VIPAS39Q9H9C1 RNU2-4P-201ENST00000606190 192 ntBASIC0.6□□□□□ -2.31
VIPAS39Q9H9C1 MIR6734-201ENST00000621166 68 ntBASIC0.6□□□□□ -2.31
VIPAS39Q9H9C1 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.133-201ENST00000363428 110 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 Y_RNA.162-201ENST00000363683 102 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 RNU6-110P-201ENST00000384508 104 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 MIR548H3-201ENST00000408771 118 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 MTCYBP9-201ENST00000431021 303 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 RNA5SP220-201ENST00000516298 104 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 MIR4744-201ENST00000581563 82 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 MIR4804-201ENST00000581683 73 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
VIPAS39Q9H9C1 AL596211.1-201ENST00000569873 2277 ntBASIC0.59□□□□□ -2.32
VIPAS39Q9H9C1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.58□□□□□ -2.32
VIPAS39Q9H9C1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.58□□□□□ -2.32
VIPAS39Q9H9C1 AL118496.2-201ENST00000448300 230 ntBASIC0.58□□□□□ -2.32
VIPAS39Q9H9C1 MTND1P19-201ENST00000511780 315 ntBASIC0.58□□□□□ -2.32
VIPAS39Q9H9C1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VIPAS39Q9H9C1 RNU6-103P-201ENST00000363686 107 ntBASIC0.57□□□□□ -2.32
VIPAS39Q9H9C1 RNY4P28-201ENST00000365281 93 ntBASIC0.57□□□□□ -2.32
VIPAS39Q9H9C1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VIPAS39Q9H9C1 Y_RNA.539-201ENST00000384635 107 ntBASIC0.57□□□□□ -2.32
VIPAS39Q9H9C1 MIR548J-201ENST00000408833 112 ntBASIC0.57□□□□□ -2.32
VIPAS39Q9H9C1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms