Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AL365205.2-201ENST00000594586 68 ntBASIC0.84□□□□□ -2.27
CMTM3Q96MX0 RNU2-4P-201ENST00000606190 192 ntBASIC0.84□□□□□ -2.27
CMTM3Q96MX0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.351-201ENST00000365436 96 ntBASIC0.83□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.452-201ENST00000384202 108 ntBASIC0.83□□□□□ -2.28
CMTM3Q96MX0 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
CMTM3Q96MX0 MIR548I3-201ENST00000408378 149 ntBASIC0.83□□□□□ -2.28
CMTM3Q96MX0 HMGN1P33-201ENST00000432945 451 ntBASIC0.83□□□□□ -2.28
CMTM3Q96MX0 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.680-201ENST00000516441 93 ntBASIC0.83□□□□□ -2.28
CMTM3Q96MX0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CMTM3Q96MX0 MIR5197-201ENST00000583721 112 ntBASIC0.83□□□□□ -2.28
CMTM3Q96MX0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR342-201ENST00000362212 99 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR337-201ENST00000362281 93 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 RNU6-923P-201ENST00000364753 107 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 SNORA20.1-201ENST00000364790 130 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 RNU6-934P-201ENST00000365154 107 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.338-201ENST00000365320 114 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.447-201ENST00000384184 113 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR605-201ENST00000385078 83 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 SNORD99-201ENST00000408612 74 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 RNU6-602P-201ENST00000411155 105 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 RPS26P5-201ENST00000418544 335 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 RNU7-62P-201ENST00000458856 62 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 snoU13.21-201ENST00000459368 105 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 RNU7-80P-201ENST00000459562 61 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 SNORD116-25-201ENST00000516517 92 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR4308-201ENST00000580634 81 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR378D2-201ENST00000580636 98 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR3149-201ENST00000584629 83 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 AL359821.1-201ENST00000605519 182 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR376A2-201ENST00000636782 80 ntBASIC0.82□□□□□ -2.28
CMTM3Q96MX0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CMTM3Q96MX0 MIR302B-201ENST00000362188 73 ntBASIC0.81□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.571-201ENST00000384753 98 ntBASIC0.81□□□□□ -2.28
CMTM3Q96MX0 TRMT112P2-201ENST00000512910 132 ntBASIC0.81□□□□□ -2.28
CMTM3Q96MX0 RNU6-111P-201ENST00000517179 105 ntBASIC0.81□□□□□ -2.28
CMTM3Q96MX0 RNU6-369P-201ENST00000362515 102 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.60-201ENST00000362831 98 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 RNY1-201ENST00000364228 113 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.454-201ENST00000384224 113 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 RNU4-70P-201ENST00000384579 139 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 RNU6-1190P-201ENST00000410811 104 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 MIR4498-201ENST00000577599 66 ntBASIC0.8□□□□□ -2.28
CMTM3Q96MX0 RNY1P10-201ENST00000363268 113 ntBASIC0.79□□□□□ -2.28
CMTM3Q96MX0 RNU6-978P-201ENST00000364371 103 ntBASIC0.79□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.307-201ENST00000365022 117 ntBASIC0.79□□□□□ -2.28
CMTM3Q96MX0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CMTM3Q96MX0 RNU6-463P-201ENST00000384340 107 ntBASIC0.79□□□□□ -2.28
CMTM3Q96MX0 RNA5SP261-201ENST00000410536 106 ntBASIC0.79□□□□□ -2.28
CMTM3Q96MX0 SNORD83.1-201ENST00000411362 77 ntBASIC0.79□□□□□ -2.28
CMTM3Q96MX0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.79□□□□□ -2.28
CMTM3Q96MX0 AC104465.1-201ENST00000611365 139 ntBASIC0.79□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.182-201ENST00000363880 111 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 Y_RNA.354-201ENST00000365448 111 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 RNU6-574P-201ENST00000384265 107 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 MIR588-201ENST00000384900 83 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 MIR18B-201ENST00000454574 71 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 snoU13.2-201ENST00000459201 104 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.78□□□□□ -2.28
CMTM3Q96MX0 RNU6-1053P-201ENST00000515930 101 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 MIR6740-201ENST00000618268 113 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 MIR6717-201ENST00000622747 73 ntBASIC0.78□□□□□ -2.28
CMTM3Q96MX0 AC023934.1-201ENST00000574529 2389 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 RNU6-275P-201ENST00000364910 107 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 RNU6-643P-201ENST00000384018 107 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 SNORA26.6-201ENST00000391256 115 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 SEPT7P4-201ENST00000437076 306 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 RNU6-977P-201ENST00000516411 103 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 MIR4771-2-201ENST00000577758 74 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 MIR4771-1-201ENST00000582617 74 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 AL162730.1-201ENST00000605734 292 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 AC091932.4-201ENST00000623386 200 ntBASIC0.77□□□□□ -2.29
CMTM3Q96MX0 Y_RNA.144-201ENST00000363521 113 ntBASIC0.76□□□□□ -2.29
CMTM3Q96MX0 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
CMTM3Q96MX0 RNU6-392P-201ENST00000364926 101 ntBASIC0.76□□□□□ -2.29
CMTM3Q96MX0 RNU1-119P-201ENST00000391122 165 ntBASIC0.76□□□□□ -2.29
CMTM3Q96MX0 RNU6-1165P-201ENST00000410119 107 ntBASIC0.76□□□□□ -2.29
CMTM3Q96MX0 AC004817.2-201ENST00000561794 651 ntBASIC0.76□□□□□ -2.29
CMTM3Q96MX0 MIR3124-201ENST00000582636 67 ntBASIC0.76□□□□□ -2.29
CMTM3Q96MX0 RMST_2.1-201ENST00000617263 136 ntBASIC0.76□□□□□ -2.29
CMTM3Q96MX0 RNU6-1319P-201ENST00000390855 104 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 RNU6-747P-201ENST00000390928 104 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 RNU6-241P-201ENST00000391148 104 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 RNA5SP127-201ENST00000411051 133 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 RNU6-177P-201ENST00000411257 104 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 AC244098.3-201ENST00000424803 96 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.75□□□□□ -2.29
CMTM3Q96MX0 MIR3152-201ENST00000579801 74 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms