Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 Y_RNA.702-201ENST00000516843 96 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 AC006006.1-201ENST00000603082 144 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.31-201ENST00000362574 102 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 RNU6-326P-201ENST00000365480 107 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 RNU6-815P-201ENST00000384080 113 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 SNORA53-201ENST00000391141 249 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 MIR1252-201ENST00000408861 65 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 MTND4LP30-201ENST00000454092 297 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.14□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.631-201ENST00000459607 101 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 RNU6-998P-201ENST00000515894 101 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 RNU6-126P-201ENST00000516685 103 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 AC133485.4-201ENST00000561835 220 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 AC037487.3-201ENST00000606668 112 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 AL008718.3-201ENST00000610217 321 ntBASIC0.14□□□□□ -2.39
CCDC43Q96MW1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.14□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.24-201ENST00000362508 103 ntBASIC0.13□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.380-201ENST00000365663 111 ntBASIC0.13□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.541-201ENST00000384640 113 ntBASIC0.13□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.13□□□□□ -2.39
CCDC43Q96MW1 SNORD93-201ENST00000408813 74 ntBASIC0.13□□□□□ -2.39
CCDC43Q96MW1 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
CCDC43Q96MW1 AC082651.2-201ENST00000496833 166 ntBASIC0.13□□□□□ -2.39
CCDC43Q96MW1 SNORA27.4-201ENST00000516650 95 ntBASIC0.13□□□□□ -2.39
CCDC43Q96MW1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.13□□□□□ -2.39
CCDC43Q96MW1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.13□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 snoU2_19.2-201ENST00000363024 80 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.217-201ENST00000364214 105 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.389-201ENST00000383924 113 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 RNU6-101P-201ENST00000410323 104 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.641-201ENST00000459414 105 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 MIR5688-201ENST00000580619 83 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 MIR6779-201ENST00000617283 64 ntBASIC0.12□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.66-201ENST00000362862 102 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 SNORA36.1-201ENST00000363424 132 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 RNU6-716P-201ENST00000365621 103 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 MIR215-201ENST00000384858 110 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 MIR644A-201ENST00000385262 94 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 RNA5SP127-201ENST00000411051 133 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.11□□□□□ -2.39
CCDC43Q96MW1 SNORA40.15-201ENST00000516884 107 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 AP003733.2-201ENST00000529409 171 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 MIR548S-201ENST00000581352 82 ntBASIC0.11□□□□□ -2.39
CCDC43Q96MW1 RNA5SP457-201ENST00000363657 124 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.229-201ENST00000364347 113 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 RNU6-740P-201ENST00000364734 105 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 RNU4-83P-201ENST00000410863 133 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 RNU7-45P-201ENST00000459460 63 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 AC131281.1-201ENST00000522984 164 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 AP001282.2-201ENST00000616149 309 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 MIR6717-201ENST00000622747 73 ntBASIC0.1□□□□□ -2.39
CCDC43Q96MW1 SNORD42.2-201ENST00000365570 69 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.419-201ENST00000384041 102 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 SNORA8.3-201ENST00000384679 139 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 AL358176.2-201ENST00000425769 204 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 AL731563.1-201ENST00000442202 214 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 RNU6-1299P-201ENST00000516316 100 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.721-201ENST00000517207 102 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.804-201ENST00000615262 101 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.4
CCDC43Q96MW1 MIR302B-201ENST00000362188 73 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 RNU6-770P-201ENST00000363929 105 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 SNORA26.6-201ENST00000391256 115 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 SNORA26-201ENST00000391286 122 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 ELOCP20-201ENST00000422460 345 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 RNU6-863P-201ENST00000515989 104 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 RNY3P15-201ENST00000516297 97 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 MIR8066-201ENST00000617280 78 ntBASIC0.08□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.07□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.214-201ENST00000364201 112 ntBASIC0.07□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.07□□□□□ -2.4
CCDC43Q96MW1 RPL21P38-201ENST00000418090 167 ntBASIC0.07□□□□□ -2.4
CCDC43Q96MW1 RPL39P25-201ENST00000449384 154 ntBASIC0.07□□□□□ -2.4
CCDC43Q96MW1 RNU6-469P-201ENST00000516253 101 ntBASIC0.07□□□□□ -2.4
CCDC43Q96MW1 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.19-201ENST00000362462 99 ntBASIC0.06□□□□□ -2.4
CCDC43Q96MW1 RNU6-597P-201ENST00000365620 102 ntBASIC0.06□□□□□ -2.4
CCDC43Q96MW1 RNU6-211P-201ENST00000384047 107 ntBASIC0.06□□□□□ -2.4
CCDC43Q96MW1 MIR626-201ENST00000385032 94 ntBASIC0.06□□□□□ -2.4
CCDC43Q96MW1 MT-TD-201ENST00000387419 68 ntBASIC0.06□□□□□ -2.4
CCDC43Q96MW1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.06□□□□□ -2.4
CCDC43Q96MW1 RNU2-59P-201ENST00000410482 191 ntBASIC0.06□□□□□ -2.4
CCDC43Q96MW1 RNA5SP330-201ENST00000517096 96 ntBASIC0.06□□□□□ -2.4
CCDC43Q96MW1 Y_RNA.16-201ENST00000362421 102 ntBASIC0.05□□□□□ -2.4
CCDC43Q96MW1 RNU6-806P-201ENST00000365147 105 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 280.9 ms