Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SNORA31.4-201ENST00000516049 129 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 RNU2-35P-201ENST00000516446 142 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 SNORA22.1-201ENST00000362701 134 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 Y_RNA.354-201ENST00000365448 111 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 Y_RNA.430-201ENST00000384081 110 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 SNORA67.3-201ENST00000384366 140 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 RNU6-429P-201ENST00000384582 108 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 SNORD41-201ENST00000386967 70 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 RPS3AP1-201ENST00000413190 320 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 RPL39P39-201ENST00000455840 151 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 AC079140.2-201ENST00000506193 142 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 RNU6-412P-201ENST00000516434 106 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 MIR3935-201ENST00000583472 104 ntBASIC1.81□□□□□ -2.12
FOXRED1Q96CU9 RNA5SP160-201ENST00000364866 120 ntBASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 SNORA70B-201ENST00000384210 135 ntBASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 SNORA3.2-201ENST00000408221 125 ntBASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 RNU7-113P-201ENST00000459273 62 ntBASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 Y_RNA.709-201ENST00000516952 92 ntBASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 AC007012.1-201ENST00000567192 175 ntBASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 MIR3163-201ENST00000581592 73 ntBASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.8□□□□□ -2.12
FOXRED1Q96CU9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 U8.2-201ENST00000363156 134 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 Y_RNA.299-201ENST00000364973 94 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 RNA5SP126-201ENST00000365092 109 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 Y_RNA.531-201ENST00000384589 121 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 SNORA26.6-201ENST00000391256 115 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 SNORA11.2-201ENST00000408318 127 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 POLR2J4-204ENST00000418424 324 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 AC005908.1-201ENST00000468701 347 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 RNU7-41P-201ENST00000515917 61 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 RNU6-589P-201ENST00000516485 107 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 AC004812.1-201ENST00000540773 146 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 CYP3A52P-201ENST00000563326 91 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 MIR8055-201ENST00000610739 97 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.79□□□□□ -2.12
FOXRED1Q96CU9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 Y_RNA.35-201ENST00000362601 101 ntBASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 SNORD1A-201ENST00000364968 72 ntBASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 RN7SKP223-201ENST00000410582 62 ntBASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 Z98742.3-201ENST00000418637 326 ntBASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 MIR6841-201ENST00000637129 72 ntBASIC1.78□□□□□ -2.12
FOXRED1Q96CU9 MIR302D-201ENST00000362275 68 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 RNA5SP489-201ENST00000410986 109 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 AL512326.2-201ENST00000426359 151 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 RPL30P7-201ENST00000479312 323 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 RNU6-947P-201ENST00000516264 106 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 MIR4679-2-201ENST00000578358 77 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 MIR3937-201ENST00000580135 106 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 Z97988.1-201ENST00000637697 135 ntBASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXRED1Q96CU9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 RNU6-44P-201ENST00000384045 107 ntBASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 RNY4P18-201ENST00000391107 89 ntBASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 RPS23P4-201ENST00000487908 423 ntBASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 AC113410.1-201ENST00000505029 247 ntBASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 AC008834.1-201ENST00000511612 175 ntBASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 AC019176.1-201ENST00000518519 225 ntBASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 MIR548AO-201ENST00000579992 96 ntBASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
FOXRED1Q96CU9 SNORD115-2-201ENST00000362842 82 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 Y_RNA.171-201ENST00000363760 102 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 SNORD115-20-201ENST00000365099 82 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 SNORD38B-201ENST00000384690 67 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 HMGN1P33-201ENST00000432945 451 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 RNA5SP33-201ENST00000516687 98 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 RNU7-6P-201ENST00000516845 62 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 AC022523.2-201ENST00000561045 150 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 MIR4648-201ENST00000580107 72 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 SNORD38B-202ENST00000625943 69 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 AL589743.1-201ENST00000551932 2712 ntBASIC1.75□□□□□ -2.13
FOXRED1Q96CU9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 SNORA22-201ENST00000383907 134 ntBASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 RNU6-1104P-201ENST00000384723 104 ntBASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 RNU4-69P-201ENST00000410677 143 ntBASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 AC063976.4-201ENST00000421971 163 ntBASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 AC027119.1-201ENST00000440877 241 ntBASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 AC009474.2-201ENST00000451383 136 ntBASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 MIR4422-201ENST00000581938 83 ntBASIC1.74□□□□□ -2.13
FOXRED1Q96CU9 SNRPGP19-201ENST00000603826 189 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms