Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 MIR3129-201ENST00000581095 76 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 MIR4744-201ENST00000581563 82 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 MIR4298-201ENST00000584380 73 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 MIR6740-201ENST00000618268 113 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 RNY1P10-201ENST00000363268 113 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.350-201ENST00000365409 98 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.542-201ENST00000384641 111 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 RNU6-493P-201ENST00000391321 108 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC63Q8NA47 AC015818.7-201ENST00000428754 109 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 AC087499.7-201ENST00000441958 109 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 AL118496.2-201ENST00000448300 230 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 RNU7-62P-201ENST00000458856 62 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 TRMT112P2-201ENST00000512910 132 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 MIR4308-201ENST00000580634 81 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 AC108706.1-201ENST00000611053 297 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 AL136317.1-201ENST00000612653 226 ntBASIC0.7□□□□□ -2.3
CCDC63Q8NA47 MIR1-1-201ENST00000362147 71 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.65-201ENST00000362846 100 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 SNORA1.1-201ENST00000364671 133 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 SNORD38B-201ENST00000384690 67 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 RNU6-578P-201ENST00000390980 103 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 SNORA26.6-201ENST00000391256 115 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 MIR1302-3-201ENST00000408128 138 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.626-201ENST00000411288 95 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 AC244098.3-201ENST00000424803 96 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 MTND3P2-201ENST00000438452 342 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 MIR4498-201ENST00000577599 66 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 MIR3128-201ENST00000581957 66 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 MIR5197-201ENST00000583721 112 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 AL365205.2-201ENST00000594586 68 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 AC062037.2-201ENST00000610137 73 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 SNORD38B-202ENST00000625943 69 ntBASIC0.69□□□□□ -2.3
CCDC63Q8NA47 MIR337-201ENST00000362281 93 ntBASIC0.68□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.7-201ENST00000362352 102 ntBASIC0.68□□□□□ -2.3
CCDC63Q8NA47 RNU6-978P-201ENST00000364371 103 ntBASIC0.68□□□□□ -2.3
CCDC63Q8NA47 RNU6-934P-201ENST00000365154 107 ntBASIC0.68□□□□□ -2.3
CCDC63Q8NA47 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CCDC63Q8NA47 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.68□□□□□ -2.3
CCDC63Q8NA47 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
CCDC63Q8NA47 RNU2-4P-201ENST00000606190 192 ntBASIC0.68□□□□□ -2.3
CCDC63Q8NA47 RMST_2.1-201ENST00000617263 136 ntBASIC0.68□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.60-201ENST00000362831 98 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.238-201ENST00000364441 102 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 RNU6-923P-201ENST00000364753 107 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC63Q8NA47 RNU6-1292P-201ENST00000383856 107 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 SNORA79-201ENST00000408376 140 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 AL121914.1-201ENST00000450188 156 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 RNU7-45P-201ENST00000459460 63 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 RNU6-237P-201ENST00000515985 71 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC63Q8NA47 MIR4771-2-201ENST00000577758 74 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 MIR4503-201ENST00000582187 83 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 MIR4771-1-201ENST00000582617 74 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 AC020891.4-201ENST00000605745 93 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 U4.1-201ENST00000620349 87 ntBASIC0.67□□□□□ -2.3
CCDC63Q8NA47 MIR342-201ENST00000362212 99 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.351-201ENST00000365436 96 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.478-201ENST00000384358 107 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 MIR588-201ENST00000384900 83 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 MIR563-201ENST00000385080 79 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 SNORD12C-201ENST00000386307 89 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 RNU1-119P-201ENST00000391122 165 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 AC004941.2-201ENST00000427009 228 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 snoU13.2-201ENST00000459201 104 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 COX6CP6-201ENST00000490840 228 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CCDC63Q8NA47 AC010332.2-201ENST00000613083 1904 ntBASIC0.66□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.121-201ENST00000363309 113 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 Y_RNA.193-201ENST00000363979 102 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 RNU6-574P-201ENST00000384265 107 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 Y_RNA.571-201ENST00000384753 98 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 RNU6-1165P-201ENST00000410119 107 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 Y_RNA.618-201ENST00000410949 107 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC63Q8NA47 AC011195.1-201ENST00000578177 177 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 MIR6717-201ENST00000622747 73 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 AC091932.4-201ENST00000623386 200 ntBASIC0.65□□□□□ -2.31
CCDC63Q8NA47 RNY1-201ENST00000364228 113 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 Y_RNA.447-201ENST00000384184 113 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 RNU6-1023P-201ENST00000516137 106 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 RNU6-111P-201ENST00000517179 105 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC63Q8NA47 MIR378D2-201ENST00000580636 98 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 MIR4804-201ENST00000581683 73 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 MIR4676-201ENST00000583078 72 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 AL353621.2-201ENST00000605340 133 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
CCDC63Q8NA47 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC63Q8NA47 Y_RNA.307-201ENST00000365022 117 ntBASIC0.63□□□□□ -2.31
CCDC63Q8NA47 Y_RNA.338-201ENST00000365320 114 ntBASIC0.63□□□□□ -2.31
CCDC63Q8NA47 MIR520F-201ENST00000384824 87 ntBASIC0.63□□□□□ -2.31
CCDC63Q8NA47 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
CCDC63Q8NA47 RNU6-1053P-201ENST00000515930 101 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 248.4 ms