Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SNORD115-4-201ENST00000363810 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-16-201ENST00000363887 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-6-201ENST00000363942 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-42-201ENST00000364273 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-15-201ENST00000364809 81 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-1-201ENST00000364961 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-26-201ENST00000365067 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-10-201ENST00000365073 81 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 RNU6-215P-201ENST00000365169 102 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-43-201ENST00000365503 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-36-201ENST00000365629 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 AL158147.1-201ENST00000443970 75 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.692-201ENST00000516627 105 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 AL512310.8-201ENST00000550183 120 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 MIR5197-201ENST00000583721 112 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 SNORD115-40-201ENST00000606510 82 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 AC243994.1-201ENST00000618627 109 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 AC008133.2-201ENST00000624540 351 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 MIR376A2-201ENST00000636782 80 ntBASIC1.89□□□□□ -2.11
SYNPOQ8N3V7 MIR302B-201ENST00000362188 73 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.81-201ENST00000362997 102 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.114-201ENST00000363265 113 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 RNU6-309P-201ENST00000364573 106 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 SNORD18B-201ENST00000365659 72 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 SNORD20-201ENST00000384550 80 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 RNU7-41P-201ENST00000515917 61 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 RNA5SP236-201ENST00000516169 116 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.690-201ENST00000516603 95 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 RNU6-1149P-201ENST00000516810 97 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 MIR3664-201ENST00000579074 99 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 MIR4791-201ENST00000607666 84 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.88□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.440-201ENST00000384120 114 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 SNORA70.7-201ENST00000384159 133 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 BTF3P4-201ENST00000418852 495 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 AC245517.4-201ENST00000448601 281 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 SNORD13-201ENST00000459299 104 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.651-201ENST00000459380 103 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 RPS29P24-201ENST00000486345 171 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 RNU5E-3P-201ENST00000515913 68 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 RNU6-772P-201ENST00000516042 105 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 RN7SKP179-201ENST00000516126 217 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 RNU6-902P-201ENST00000517212 91 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 AL596211.1-201ENST00000569873 2277 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 MTND5P32-201ENST00000560711 1802 ntBASIC1.87□□□□□ -2.11
SYNPOQ8N3V7 AL442644.1-201ENST00000454390 3105 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 RNU6-834P-201ENST00000362367 110 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 RNY1P10-201ENST00000363268 113 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 AL627390.1-201ENST00000396055 340 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 SCARNA15-202ENST00000516881 127 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 AL096861.1-201ENST00000610899 123 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 MIR4251-201ENST00000635819 61 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 MIR3914-2-201ENST00000637339 95 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
SYNPOQ8N3V7 MIR1287-201ENST00000408492 90 ntBASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 Y_RNA.617-201ENST00000410920 90 ntBASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 RPS29P29-201ENST00000456396 171 ntBASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 CYP3A52P-201ENST00000563326 91 ntBASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 AL022345.2-201ENST00000606307 135 ntBASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
SYNPOQ8N3V7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 SNORA25.3-201ENST00000363205 127 ntBASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 RNU6-321P-201ENST00000410912 106 ntBASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 AL035398.1-201ENST00000430869 322 ntBASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 RNU2-11P-201ENST00000459191 187 ntBASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 RNU7-80P-201ENST00000459562 61 ntBASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 MIR3192-201ENST00000584920 77 ntBASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
SYNPOQ8N3V7 RNU1-133P-201ENST00000364867 167 ntBASIC1.83□□□□□ -2.12
SYNPOQ8N3V7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.83□□□□□ -2.12
SYNPOQ8N3V7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.83□□□□□ -2.12
SYNPOQ8N3V7 Y_RNA.630-201ENST00000411370 108 ntBASIC1.83□□□□□ -2.12
SYNPOQ8N3V7 AP1B1P2-201ENST00000416196 106 ntBASIC1.83□□□□□ -2.12
SYNPOQ8N3V7 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
SYNPOQ8N3V7 AC108081.1-201ENST00000604358 221 ntBASIC1.83□□□□□ -2.12
SYNPOQ8N3V7 AL359821.1-201ENST00000605519 182 ntBASIC1.83□□□□□ -2.12
SYNPOQ8N3V7 RNU6-647P-201ENST00000364243 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms