Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNY3P14-201ENST00000384309 102 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 MIR526A2-201ENST00000390198 65 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 SNORA26.6-201ENST00000391256 115 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 SNORD93-201ENST00000408813 74 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 RNU7-96P-201ENST00000459535 64 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 AC082651.2-201ENST00000496833 166 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 RNU6-504P-201ENST00000516568 104 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 AC131281.1-201ENST00000522984 164 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.214-201ENST00000364201 112 ntBASIC0.1□□□□□ -2.39
CCDC50Q8IVM0 RNU6-326P-201ENST00000365480 107 ntBASIC0.1□□□□□ -2.39
CCDC50Q8IVM0 MT-TF-201ENST00000387314 71 ntBASIC0.1□□□□□ -2.39
CCDC50Q8IVM0 SNORA27.4-201ENST00000516650 95 ntBASIC0.1□□□□□ -2.39
CCDC50Q8IVM0 uc_338.16-201ENST00000621804 95 ntBASIC0.1□□□□□ -2.39
CCDC50Q8IVM0 MIR6717-201ENST00000622747 73 ntBASIC0.1□□□□□ -2.39
CCDC50Q8IVM0 MIR376A2-201ENST00000636782 80 ntBASIC0.1□□□□□ -2.39
CCDC50Q8IVM0 SNORD114-23-201ENST00000363536 72 ntBASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 RNU6-514P-201ENST00000384208 107 ntBASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 MT-TT-201ENST00000387460 66 ntBASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 RNU6-101P-201ENST00000410323 104 ntBASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 RNU4-83P-201ENST00000410863 133 ntBASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 RNY3P15-201ENST00000516297 97 ntBASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.19-201ENST00000362462 99 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 RNU6-770P-201ENST00000363929 105 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.634-201ENST00000364811 113 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 RNU6-1189P-201ENST00000383958 107 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 RNU6-484P-201ENST00000384016 107 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 SNORA1-201ENST00000384107 130 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 RNU6-1228P-201ENST00000391014 107 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 SNORA53-201ENST00000391141 249 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.622-201ENST00000411091 108 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 SNORA40.15-201ENST00000516884 107 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 AP003733.2-201ENST00000529409 171 ntBASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.08□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.304-201ENST00000365011 112 ntBASIC0.07□□□□□ -2.4
CCDC50Q8IVM0 RNU6-211P-201ENST00000384047 107 ntBASIC0.07□□□□□ -2.4
CCDC50Q8IVM0 RNU6-474P-201ENST00000384243 107 ntBASIC0.07□□□□□ -2.4
CCDC50Q8IVM0 MIR518E-201ENST00000385252 88 ntBASIC0.07□□□□□ -2.4
CCDC50Q8IVM0 MTND5P22-201ENST00000458380 195 ntBASIC0.07□□□□□ -2.4
CCDC50Q8IVM0 RNU6-1299P-201ENST00000516316 100 ntBASIC0.07□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.64-201ENST00000362845 102 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 SNORA8.3-201ENST00000384679 139 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 MIR598-201ENST00000384868 97 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 MIR626-201ENST00000385032 94 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 AL731563.1-201ENST00000442202 214 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 AC069271.1-201ENST00000445577 156 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 SNRPGP8-201ENST00000454064 226 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 AC037487.3-201ENST00000606668 112 ntBASIC0.06□□□□□ -2.4
CCDC50Q8IVM0 MIR302B-201ENST00000362188 73 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.28-201ENST00000362554 111 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 RNU6-403P-201ENST00000363163 104 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.117-201ENST00000363294 101 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.152-201ENST00000363578 100 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.351-201ENST00000365436 96 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 U8.15-201ENST00000390947 134 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 SCARNA24.2-201ENST00000516968 130 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 AC112693.2-201ENST00000556538 232 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 AL662814.1-201ENST00000617364 121 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 MTND4P29-201ENST00000503122 1372 ntBASIC0.05□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.210-201ENST00000364161 110 ntBASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 RNY1-201ENST00000364228 113 ntBASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 AL512326.2-201ENST00000426359 151 ntBASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 MTND4LP30-201ENST00000454092 297 ntBASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 RNU6-126P-201ENST00000516685 103 ntBASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 RNU6-453P-201ENST00000516819 85 ntBASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 RNA5SP268-201ENST00000516828 124 ntBASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.04□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.23-201ENST00000362496 106 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 RNU6-1289P-201ENST00000384431 106 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.588-201ENST00000391254 102 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 RNA5SP237-201ENST00000410414 113 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 RNU2-59P-201ENST00000410482 191 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 SNORA31.14-201ENST00000516728 116 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 Y_RNA.721-201ENST00000517207 102 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 MIR5688-201ENST00000580619 83 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 MIR4801-201ENST00000582704 82 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 MIR7107-201ENST00000611489 80 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 MIR6755-201ENST00000619993 66 ntBASIC0.03□□□□□ -2.4
CCDC50Q8IVM0 UBE2WP1-201ENST00000362030 340 ntBASIC0.02□□□□□ -2.41
CCDC50Q8IVM0 snoU2_19.4-201ENST00000364329 80 ntBASIC0.02□□□□□ -2.41
CCDC50Q8IVM0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.02□□□□□ -2.41
CCDC50Q8IVM0 Y_RNA.527-201ENST00000384573 102 ntBASIC0.02□□□□□ -2.41
CCDC50Q8IVM0 MT-TD-201ENST00000387419 68 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms