Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 Y_RNA.220-201ENST00000364244 109 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 RNU6-203P-201ENST00000384038 104 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 Y_RNA.537-201ENST00000384626 109 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 SNORD77B-201ENST00000391112 67 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 MIR1302-4-201ENST00000408701 150 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 MIR1270-201ENST00000459320 83 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 RNU6-158P-201ENST00000517104 100 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 MIR4435-1-201ENST00000582552 80 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 AC046143.2-201ENST00000609789 160 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 MIR2052-201ENST00000636055 55 ntBASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 Y_RNA.430-201ENST00000384081 110 ntBASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 Y_RNA.558-201ENST00000384685 113 ntBASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 MIR577-201ENST00000385196 96 ntBASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 RNU6-917P-201ENST00000516294 104 ntBASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 RNU6-762P-201ENST00000517107 102 ntBASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 MALAT1.1-201ENST00000618249 95 ntBASIC2.18□□□□□ -2.06
RNF111Q6ZNA4 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 RNA5SP289-201ENST00000362332 137 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 SNORA67.1-201ENST00000364749 141 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 RNU6-360P-201ENST00000390944 104 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 Y_RNA.601-201ENST00000410500 113 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 AL353813.1-201ENST00000440700 253 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 RNU6-717P-201ENST00000459076 104 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 RNU6-795P-201ENST00000516323 103 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 MIR4694-201ENST00000578534 80 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RNF111Q6ZNA4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 RNU6-832P-201ENST00000363319 107 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 SNORA1.1-201ENST00000364671 133 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 Y_RNA.342-201ENST00000365352 113 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 RNU6-679P-201ENST00000391003 106 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 RNA5SP508-201ENST00000411327 119 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 snoU13.16-201ENST00000459350 104 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 RNU6-844P-201ENST00000517175 102 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 MIR3124-201ENST00000582636 67 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 AL442128.1-201ENST00000615151 90 ntBASIC2.16□□□□□ -2.06
RNF111Q6ZNA4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
RNF111Q6ZNA4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 Y_RNA.10-201ENST00000362371 110 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 RNA5SP276-201ENST00000362580 94 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 RNU6-521P-201ENST00000516663 105 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 MIR4764-201ENST00000580680 88 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 AC012531.4-201ENST00000616509 177 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 AC008133.2-201ENST00000624540 351 ntBASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RNF111Q6ZNA4 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 MIR520C-201ENST00000385005 87 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 SNORA26.2-201ENST00000390922 122 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 RNY4P29-201ENST00000410801 97 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 RNU4-53P-201ENST00000410828 140 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 RNU7-43P-201ENST00000516554 64 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 RNU2-19P-201ENST00000517288 84 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 MIR8055-201ENST00000610739 97 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
RNF111Q6ZNA4 Y_RNA.388-201ENST00000383919 113 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 RNU6-342P-201ENST00000384521 104 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 AC245047.7-201ENST00000440265 293 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 RN7SL429P-201ENST00000479090 223 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 RN7SL489P-201ENST00000486185 223 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 RN7SL327P-201ENST00000488659 223 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 AC008413.1-201ENST00000511864 177 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 RNU7-61P-201ENST00000515897 61 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 MIR548Z-201ENST00000584743 97 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 RN7SL853P-201ENST00000617250 223 ntBASIC2.13□□□□□ -2.07
RNF111Q6ZNA4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 RNU6-170P-201ENST00000362832 104 ntBASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 RNA5SP160-201ENST00000364866 120 ntBASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 RNU6-644P-201ENST00000391155 98 ntBASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 AC055731.1-201ENST00000474387 401 ntBASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 MIR6895-201ENST00000613497 78 ntBASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 AL590808.1-201ENST00000618696 141 ntBASIC2.12□□□□□ -2.07
RNF111Q6ZNA4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 RNA5SP126-201ENST00000365092 109 ntBASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms