Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 AL020996.3-201ENST00000606617 222 ntBASIC2.1□□□□□ -2.07
ZNF394Q53GI3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.1□□□□□ -2.07
ZNF394Q53GI3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
ZNF394Q53GI3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ZNF394Q53GI3 Y_RNA.430-201ENST00000384081 110 ntBASIC2.09□□□□□ -2.07
ZNF394Q53GI3 MIR504-201ENST00000385065 83 ntBASIC2.09□□□□□ -2.07
ZNF394Q53GI3 MIRLET7F2-201ENST00000385277 83 ntBASIC2.09□□□□□ -2.07
ZNF394Q53GI3 RNA5SP338-201ENST00000410495 85 ntBASIC2.09□□□□□ -2.07
ZNF394Q53GI3 MIR3935-201ENST00000583472 104 ntBASIC2.09□□□□□ -2.07
ZNF394Q53GI3 AC092881.1-201ENST00000638218 2733 ntBASIC2.09□□□□□ -2.08
ZNF394Q53GI3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZNF394Q53GI3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZNF394Q53GI3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ZNF394Q53GI3 Y_RNA.261-201ENST00000364631 102 ntBASIC2.08□□□□□ -2.08
ZNF394Q53GI3 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
ZNF394Q53GI3 RNU7-41P-201ENST00000515917 61 ntBASIC2.08□□□□□ -2.08
ZNF394Q53GI3 AC019176.1-201ENST00000518519 225 ntBASIC2.08□□□□□ -2.08
ZNF394Q53GI3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.08□□□□□ -2.08
ZNF394Q53GI3 MIR4305-201ENST00000583252 102 ntBASIC2.08□□□□□ -2.08
ZNF394Q53GI3 AC025166.1-201ENST00000612411 163 ntBASIC2.08□□□□□ -2.08
ZNF394Q53GI3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZNF394Q53GI3 AP000648.3-201ENST00000623539 4507 ntBASIC2.08□□□□□ -2.08
ZNF394Q53GI3 RNU6-913P-201ENST00000390913 95 ntBASIC2.07□□□□□ -2.08
ZNF394Q53GI3 AL022718.1-201ENST00000412004 84 ntBASIC2.07□□□□□ -2.08
ZNF394Q53GI3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.07□□□□□ -2.08
ZNF394Q53GI3 COX6CP6-201ENST00000490840 228 ntBASIC2.07□□□□□ -2.08
ZNF394Q53GI3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.07□□□□□ -2.08
ZNF394Q53GI3 SNORD114-1-201ENST00000362705 72 ntBASIC2.06□□□□□ -2.08
ZNF394Q53GI3 SNORA1.1-201ENST00000364671 133 ntBASIC2.06□□□□□ -2.08
ZNF394Q53GI3 Y_RNA.354-201ENST00000365448 111 ntBASIC2.06□□□□□ -2.08
ZNF394Q53GI3 Y_RNA.629-201ENST00000411368 105 ntBASIC2.06□□□□□ -2.08
ZNF394Q53GI3 RNU7-164P-201ENST00000459221 62 ntBASIC2.06□□□□□ -2.08
ZNF394Q53GI3 AL096861.1-201ENST00000610899 123 ntBASIC2.06□□□□□ -2.08
ZNF394Q53GI3 MIR7843-201ENST00000622274 79 ntBASIC2.06□□□□□ -2.08
ZNF394Q53GI3 MIR6717-201ENST00000622747 73 ntBASIC2.06□□□□□ -2.08
ZNF394Q53GI3 Y_RNA.273-201ENST00000364703 102 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 Y_RNA.298-201ENST00000364960 107 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 SNORA26.6-201ENST00000391256 115 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 RNA5SP144-201ENST00000410846 116 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 RPS3AP1-201ENST00000413190 320 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.05□□□□□ -2.08
ZNF394Q53GI3 SNORA31.4-201ENST00000516049 129 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 RNU6-781P-201ENST00000516377 101 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 IGKV1-22-201ENST00000524313 326 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 MIR3664-201ENST00000579074 99 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 MIR8055-201ENST00000610739 97 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
ZNF394Q53GI3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.05□□□□□ -2.08
ZNF394Q53GI3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 MIR6841-201ENST00000637129 72 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 Z97988.1-201ENST00000637697 135 ntBASIC2.05□□□□□ -2.08
ZNF394Q53GI3 RNU4-16P-201ENST00000364737 141 ntBASIC2.04□□□□□ -2.08
ZNF394Q53GI3 AC003989.2-201ENST00000440224 169 ntBASIC2.04□□□□□ -2.08
ZNF394Q53GI3 AL133373.1-201ENST00000497098 94 ntBASIC2.04□□□□□ -2.08
ZNF394Q53GI3 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.04□□□□□ -2.08
ZNF394Q53GI3 CYP3A52P-201ENST00000563326 91 ntBASIC2.04□□□□□ -2.08
ZNF394Q53GI3 MIR759-201ENST00000390224 91 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 MIR1263-201ENST00000408324 86 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 snoU13.15-201ENST00000459407 104 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 RNY4P20-201ENST00000516678 93 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 RNU6-902P-201ENST00000517212 91 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 AL512310.8-201ENST00000550183 120 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 MIR3192-201ENST00000584920 77 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.03□□□□□ -2.08
ZNF394Q53GI3 SNORA22.1-201ENST00000362701 134 ntBASIC2.02□□□□□ -2.09
ZNF394Q53GI3 Y_RNA.213-201ENST00000364178 111 ntBASIC2.02□□□□□ -2.09
ZNF394Q53GI3 Y_RNA.528-201ENST00000384575 108 ntBASIC2.02□□□□□ -2.09
ZNF394Q53GI3 AC009474.2-201ENST00000451383 136 ntBASIC2.02□□□□□ -2.09
ZNF394Q53GI3 MIR548AO-201ENST00000579992 96 ntBASIC2.02□□□□□ -2.09
ZNF394Q53GI3 HSPE1P19-201ENST00000603327 295 ntBASIC2.02□□□□□ -2.09
ZNF394Q53GI3 AL121890.5-201ENST00000620848 304 ntBASIC2.02□□□□□ -2.09
ZNF394Q53GI3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
ZNF394Q53GI3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ZNF394Q53GI3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ZNF394Q53GI3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
ZNF394Q53GI3 Y_RNA.198-201ENST00000364013 98 ntBASIC2.01□□□□□ -2.09
ZNF394Q53GI3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ZNF394Q53GI3 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
ZNF394Q53GI3 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
ZNF394Q53GI3 POLR2J4-204ENST00000418424 324 ntBASIC2.01□□□□□ -2.09
ZNF394Q53GI3 RNU7-123P-201ENST00000515911 60 ntBASIC2.01□□□□□ -2.09
ZNF394Q53GI3 RNU6-947P-201ENST00000516264 106 ntBASIC2.01□□□□□ -2.09
ZNF394Q53GI3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
ZNF394Q53GI3 MTND5P18-201ENST00000445624 1801 ntBASIC2.01□□□□□ -2.09
ZNF394Q53GI3 Y_RNA.353-201ENST00000365440 108 ntBASIC2□□□□□ -2.09
ZNF394Q53GI3 SNORA40.18-201ENST00000391200 128 ntBASIC2□□□□□ -2.09
ZNF394Q53GI3 RNU7-45P-201ENST00000459460 63 ntBASIC2□□□□□ -2.09
ZNF394Q53GI3 RNU11-2P-201ENST00000516898 142 ntBASIC2□□□□□ -2.09
ZNF394Q53GI3 MIR4524B-201ENST00000581569 115 ntBASIC2□□□□□ -2.09
ZNF394Q53GI3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.99□□□□□ -2.09
ZNF394Q53GI3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.99□□□□□ -2.09
ZNF394Q53GI3 Y_RNA.525-201ENST00000384570 113 ntBASIC1.99□□□□□ -2.09
ZNF394Q53GI3 MIR1289-2-201ENST00000408360 111 ntBASIC1.99□□□□□ -2.09
ZNF394Q53GI3 RPS27P16-201ENST00000425758 201 ntBASIC1.99□□□□□ -2.09
ZNF394Q53GI3 AC245047.7-201ENST00000440265 293 ntBASIC1.99□□□□□ -2.09
ZNF394Q53GI3 RNU2-35P-201ENST00000516446 142 ntBASIC1.99□□□□□ -2.09
ZNF394Q53GI3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
ZNF394Q53GI3 AL670379.3-201ENST00000605040 251 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms