Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 PDCD5P2-201ENST00000507570 312 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 AC015688.6-201ENST00000577737 104 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 SNORA22-201ENST00000383907 134 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 MIR548A3-201ENST00000385297 97 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 HMGN2P32-201ENST00000444648 269 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 HSPE1P24-201ENST00000450782 238 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 snoU13.9-201ENST00000458927 103 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 RNU6-240P-201ENST00000516098 97 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.709-201ENST00000516952 92 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 AP003484.1-201ENST00000530974 250 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 MIR4255-201ENST00000579351 72 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 AL670379.3-201ENST00000605040 251 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 AL121890.5-201ENST00000620848 304 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 MTND5P18-201ENST00000445624 1801 ntBASIC1.81□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.35-201ENST00000362601 101 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 AC015922.2-201ENST00000435593 184 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 RNU6-917P-201ENST00000516294 104 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 RNU6-589P-201ENST00000516485 107 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 SNORA18.7-201ENST00000516910 131 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 AC019176.1-201ENST00000518519 225 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 AL512598.1-201ENST00000610158 273 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 AL137067.1-201ENST00000615933 120 ntBASIC1.8□□□□□ -2.12
SLC44A4Q53GD3 MIR342-201ENST00000362212 99 ntBASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 SNORD38C-201ENST00000384381 69 ntBASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 SNORD116-21-201ENST00000384507 92 ntBASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.528-201ENST00000384575 108 ntBASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 RNU7-95P-201ENST00000459222 64 ntBASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 HSPE1P19-201ENST00000603327 295 ntBASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 BX248123.2-201ENST00000606318 124 ntBASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SLC44A4Q53GD3 MIR302D-201ENST00000362275 68 ntBASIC1.78□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.78□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.649-201ENST00000459077 103 ntBASIC1.78□□□□□ -2.12
SLC44A4Q53GD3 RNU7-181P-201ENST00000517234 74 ntBASIC1.78□□□□□ -2.12
SLC44A4Q53GD3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.78□□□□□ -2.12
SLC44A4Q53GD3 RNU6-349P-201ENST00000362402 107 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 MIR452-201ENST00000385020 85 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 SNX2P2-201ENST00000424553 323 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 RNU6-113P-201ENST00000516653 101 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 RNU7-70P-201ENST00000516941 66 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 FAM106DP-201ENST00000586416 501 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 MIR4679-1-201ENST00000637619 75 ntBASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SLC44A4Q53GD3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 SNORD1A-201ENST00000364968 72 ntBASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 RNU6-690P-201ENST00000365242 106 ntBASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 AC063976.4-201ENST00000421971 163 ntBASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 AC087499.4-201ENST00000448505 178 ntBASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 RPS26P48-201ENST00000491713 339 ntBASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 RNU6-922P-201ENST00000516753 99 ntBASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 AL596211.1-201ENST00000569873 2277 ntBASIC1.76□□□□□ -2.13
SLC44A4Q53GD3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 RNU1-133P-201ENST00000364867 167 ntBASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 MIR518E-201ENST00000385252 88 ntBASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 U8.17-201ENST00000391292 132 ntBASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 RNA5SP445-201ENST00000515889 115 ntBASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 MIR3613-201ENST00000579844 87 ntBASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 AC091932.4-201ENST00000623386 200 ntBASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SLC44A4Q53GD3 RNU4-16P-201ENST00000364737 141 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 RNU6-147P-201ENST00000383983 107 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 SNORA27-201ENST00000384323 126 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 AC008834.1-201ENST00000511612 175 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 SNORA31.4-201ENST00000516049 129 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 RNU6-830P-201ENST00000516353 107 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 MIR3198-2-201ENST00000577868 80 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 AL442644.1-201ENST00000454390 3105 ntBASIC1.74□□□□□ -2.13
SLC44A4Q53GD3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 RNU6-755P-201ENST00000364400 103 ntBASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 RNY1P6-201ENST00000384193 109 ntBASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 MT-TI-201ENST00000387365 69 ntBASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 RNA5SP136-201ENST00000410906 107 ntBASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 RNY4P20-201ENST00000516678 93 ntBASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 SNORD53B-201ENST00000577887 78 ntBASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 AC021443.1-201ENST00000604478 211 ntBASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SLC44A4Q53GD3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 265.3 ms