Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU6-1217P-201ENST00000411276 104 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 RNU6-785P-201ENST00000411324 104 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 AF228730.3-201ENST00000436691 102 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 RNU7-102P-201ENST00000458948 62 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 RNU2-11P-201ENST00000459191 187 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 RNU7-185P-201ENST00000459215 60 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.31□□□□□ -2.36
RAB40BQ12829 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.31□□□□□ -2.36
RAB40BQ12829 RNU6-998P-201ENST00000515894 101 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.31□□□□□ -2.36
RAB40BQ12829 MIR4680-201ENST00000580906 66 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.31□□□□□ -2.36
RAB40BQ12829 U6.90-201ENST00000614007 104 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 U6.70-201ENST00000620287 104 ntBASIC0.31□□□□□ -2.36
RAB40BQ12829 MIR342-201ENST00000362212 99 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 Y_RNA.66-201ENST00000362862 102 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 Y_RNA.91-201ENST00000363042 107 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 RNU6-1189P-201ENST00000383958 107 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 RNU6-1289P-201ENST00000384431 106 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 MIR626-201ENST00000385032 94 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 RNA5SP193-201ENST00000410353 107 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 RNU6-1190P-201ENST00000410811 104 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 AC113618.1-201ENST00000416747 285 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 MTND5P22-201ENST00000458380 195 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 RNU6-1338P-201ENST00000516328 91 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 AC090897.1-201ENST00000580909 226 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 AC008608.1-201ENST00000603910 127 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.3□□□□□ -2.36
RAB40BQ12829 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.3□□□□□ -2.36
RAB40BQ12829 Y_RNA.216-201ENST00000364205 93 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 Y_RNA.275-201ENST00000364726 110 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 Y_RNA.634-201ENST00000364811 113 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 Y_RNA.410-201ENST00000383992 113 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 Y_RNA.432-201ENST00000384087 111 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 Y_RNA.535-201ENST00000384612 99 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 MIR216A-201ENST00000385063 110 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 MIR613-201ENST00000385248 95 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 SNORD12C-201ENST00000386307 89 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 MT-TF-201ENST00000387314 71 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 SNORD100-201ENST00000408573 76 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 RNU2-55P-201ENST00000411146 174 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 RNU7-156P-201ENST00000517214 74 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.29□□□□□ -2.36
RAB40BQ12829 MIR3171-201ENST00000584270 74 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 PVT1_3.1-201ENST00000620853 95 ntBASIC0.29□□□□□ -2.36
RAB40BQ12829 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
RAB40BQ12829 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
RAB40BQ12829 Y_RNA.440-201ENST00000384120 114 ntBASIC0.28□□□□□ -2.36
RAB40BQ12829 Y_RNA.622-201ENST00000411091 108 ntBASIC0.28□□□□□ -2.36
RAB40BQ12829 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
RAB40BQ12829 SNORA25.12-201ENST00000516202 82 ntBASIC0.28□□□□□ -2.36
RAB40BQ12829 SNORD92-201ENST00000585078 85 ntBASIC0.28□□□□□ -2.36
RAB40BQ12829 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.28□□□□□ -2.36
RAB40BQ12829 MIR302B-201ENST00000362188 73 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 Y_RNA.117-201ENST00000363294 101 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 Y_RNA.153-201ENST00000363615 91 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 RNU5E-4P-201ENST00000364931 120 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 Y_RNA.393-201ENST00000383936 102 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 RNU6-484P-201ENST00000384016 107 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 MIR563-201ENST00000385080 79 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 RNU6-1203P-201ENST00000410703 110 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.27□□□□□ -2.37
RAB40BQ12829 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.27□□□□□ -2.37
RAB40BQ12829 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 RNA5SP153-201ENST00000516498 76 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
RAB40BQ12829 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 MIR30D-201ENST00000362283 70 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 Y_RNA.44-201ENST00000362676 108 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 Y_RNA.61-201ENST00000362835 102 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 RNA5SP517-201ENST00000364724 117 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 Y_RNA.304-201ENST00000365011 112 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 RNY3P5-201ENST00000384127 102 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 MT-TT-201ENST00000387460 66 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.26□□□□□ -2.37
RAB40BQ12829 RNA5SP94-201ENST00000516917 108 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 RNU6-570P-201ENST00000517051 105 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 uc_338.16-201ENST00000621804 95 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 AC010487.4-201ENST00000637027 61 ntBASIC0.26□□□□□ -2.37
RAB40BQ12829 Y_RNA.199-201ENST00000364014 102 ntBASIC0.25□□□□□ -2.37
RAB40BQ12829 RNA5SP117-201ENST00000365294 118 ntBASIC0.25□□□□□ -2.37
RAB40BQ12829 MIR518A1-201ENST00000385068 85 ntBASIC0.25□□□□□ -2.37
RAB40BQ12829 SNORA40.8-201ENST00000411034 126 ntBASIC0.25□□□□□ -2.37
RAB40BQ12829 AC020661.2-201ENST00000560114 134 ntBASIC0.25□□□□□ -2.37
RAB40BQ12829 AC097639.2-201ENST00000603159 172 ntBASIC0.25□□□□□ -2.37
RAB40BQ12829 Y_RNA.202-201ENST00000364083 110 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 RNU6-867P-201ENST00000364956 107 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 Y_RNA.351-201ENST00000365436 96 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 AL606845.1-201ENST00000404881 255 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 RNA5SP261-201ENST00000410536 106 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 RPL39P25-201ENST00000449384 154 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 SNRPGP8-201ENST00000454064 226 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 RNU7-45P-201ENST00000459460 63 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 RNU6-448P-201ENST00000517052 107 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 RNU6-1137P-201ENST00000517073 99 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.24□□□□□ -2.37
RAB40BQ12829 MIR7111-201ENST00000619751 72 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 311 ms