Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 SNORD1A-201ENST00000364968 72 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 Y_RNA.454-201ENST00000384224 113 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 Y_RNA.617-201ENST00000410920 90 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 AC107297.1-201ENST00000459991 176 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 IGKV1-22-201ENST00000524313 326 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 AL645939.4-201ENST00000604495 135 ntBASIC1.7□□□□□ -2.14
NPTX2P47972 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NPTX2P47972 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.69□□□□□ -2.14
NPTX2P47972 RNU6-60P-201ENST00000364792 103 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 MIR570-201ENST00000384917 97 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 AC079140.2-201ENST00000506193 142 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 RNU6-237P-201ENST00000515985 71 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 SNORA31.4-201ENST00000516049 129 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 RNU6-240P-201ENST00000516098 97 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 RN7SKP179-201ENST00000516126 217 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 Y_RNA.712-201ENST00000517011 92 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 SNORD53B-201ENST00000577887 78 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.69□□□□□ -2.14
NPTX2P47972 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.69□□□□□ -2.14
NPTX2P47972 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
NPTX2P47972 RNA5SP432-201ENST00000362480 116 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 Y_RNA.366-201ENST00000365540 102 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 SNORA24-201ENST00000384096 131 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RNY1P6-201ENST00000384193 109 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 AL035398.1-201ENST00000430869 322 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RNU2-11P-201ENST00000459191 187 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RNU6-322P-201ENST00000516010 103 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RN7SKP19-201ENST00000516016 252 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RNU6-781P-201ENST00000516377 101 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RNU7-43P-201ENST00000516554 64 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 AC133485.4-201ENST00000561835 220 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 AC138907.4-201ENST00000570107 226 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
NPTX2P47972 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NPTX2P47972 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.68□□□□□ -2.14
NPTX2P47972 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
NPTX2P47972 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 SNORD58C-201ENST00000365223 64 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 RNU6-690P-201ENST00000365242 106 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 SNORA70.7-201ENST00000384159 133 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 MIR517C-201ENST00000385103 95 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 SNORD41-201ENST00000386967 70 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 AL451046.2-201ENST00000403074 277 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 AC108667.1-201ENST00000428618 249 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 AC027119.1-201ENST00000440877 241 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 RPS29P29-201ENST00000456396 171 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 RNU6-1061P-201ENST00000516530 99 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 RNU6-922P-201ENST00000516753 99 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 MIR4764-201ENST00000580680 88 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.67□□□□□ -2.14
NPTX2P47972 HSPE1P19-201ENST00000603327 295 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 MIR4791-201ENST00000607666 84 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 AC243994.1-201ENST00000618627 109 ntBASIC1.67□□□□□ -2.14
NPTX2P47972 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NPTX2P47972 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
NPTX2P47972 Y_RNA.630-201ENST00000411370 108 ntBASIC1.66□□□□□ -2.14
NPTX2P47972 RNU7-67P-201ENST00000459003 62 ntBASIC1.66□□□□□ -2.14
NPTX2P47972 RNU6-958P-201ENST00000516995 106 ntBASIC1.66□□□□□ -2.14
NPTX2P47972 AL137067.1-201ENST00000615933 120 ntBASIC1.66□□□□□ -2.14
NPTX2P47972 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.66□□□□□ -2.14
NPTX2P47972 MIR3914-2-201ENST00000637339 95 ntBASIC1.66□□□□□ -2.14
NPTX2P47972 MIR302B-201ENST00000362188 73 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 RNU6-1290P-201ENST00000362957 109 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 RNU4-16P-201ENST00000364737 141 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 Y_RNA.537-201ENST00000384626 109 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 Y_RNA.563-201ENST00000384707 108 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 MIR520C-201ENST00000385005 87 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 MIRLET7F2-201ENST00000385277 83 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 RNU4-62P-201ENST00000410125 130 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 RNU7-53P-201ENST00000516705 60 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 AL359881.1-201ENST00000602916 267 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 AL513534.2-201ENST00000603836 250 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 AL121890.5-201ENST00000620848 304 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 AC008133.2-201ENST00000624540 351 ntBASIC1.65□□□□□ -2.15
NPTX2P47972 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
NPTX2P47972 SNORA51.10-201ENST00000384418 136 ntBASIC1.64□□□□□ -2.15
NPTX2P47972 RNU6-1067P-201ENST00000384752 107 ntBASIC1.64□□□□□ -2.15
NPTX2P47972 MIR1304-201ENST00000408243 91 ntBASIC1.64□□□□□ -2.15
NPTX2P47972 RNU6-735P-201ENST00000410612 107 ntBASIC1.64□□□□□ -2.15
NPTX2P47972 RNU7-45P-201ENST00000459460 63 ntBASIC1.64□□□□□ -2.15
NPTX2P47972 SNORD111.1-201ENST00000516421 86 ntBASIC1.64□□□□□ -2.15
NPTX2P47972 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.64□□□□□ -2.15
NPTX2P47972 AP000942.3-201ENST00000603702 160 ntBASIC1.64□□□□□ -2.15
NPTX2P47972 Y_RNA.140-201ENST00000363474 103 ntBASIC1.63□□□□□ -2.15
NPTX2P47972 RNU6-1065P-201ENST00000384513 106 ntBASIC1.63□□□□□ -2.15
NPTX2P47972 RNU6-913P-201ENST00000390913 95 ntBASIC1.63□□□□□ -2.15
NPTX2P47972 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
NPTX2P47972 RNU7-73P-201ENST00000458743 63 ntBASIC1.63□□□□□ -2.15
NPTX2P47972 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.63□□□□□ -2.15
NPTX2P47972 RNU7-41P-201ENST00000515917 61 ntBASIC1.63□□□□□ -2.15
NPTX2P47972 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
NPTX2P47972 MIR3937-201ENST00000580135 106 ntBASIC1.63□□□□□ -2.15
NPTX2P47972 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms