Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 Y_RNA.677-201ENST00000516401 85 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 Y_RNA.694-201ENST00000516677 117 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 IGKV1-22-201ENST00000524313 326 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 AC011604.1-201ENST00000545978 196 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 MIR3129-201ENST00000581095 76 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 MIR2681-201ENST00000581814 105 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 MIR4438-201ENST00000585271 93 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 RNU1-22P-201ENST00000363334 158 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 SNORD114-27-201ENST00000363766 70 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 SNORA1-201ENST00000384107 130 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 MIR7-2-201ENST00000384970 110 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.49□□□□□ -2.17
HOXC13P31276 RPS29P24-201ENST00000486345 171 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 OR9P1P-201ENST00000496431 281 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 RNU7-172P-201ENST00000517125 64 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 AC019176.1-201ENST00000518519 225 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 AC007751.1-201ENST00000529260 376 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.49□□□□□ -2.17
HOXC13P31276 AC022217.4-201ENST00000604389 163 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 JPX_2.1-201ENST00000614161 69 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 MIR8054-201ENST00000620877 86 ntBASIC1.49□□□□□ -2.17
HOXC13P31276 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.49□□□□□ -2.17
HOXC13P31276 RNU6-1123P-201ENST00000362347 106 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 RNU6-106P-201ENST00000384405 107 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 MIR513A1-201ENST00000385138 129 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 MIRLET7F2-201ENST00000385277 83 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 SNORA12.1-201ENST00000390873 148 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 RNU6-440P-201ENST00000390882 105 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 RNU11-5P-201ENST00000391216 129 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 MIR891A-201ENST00000401237 79 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 RNU6-554P-201ENST00000410466 106 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 RNA5SP127-201ENST00000411051 133 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.48□□□□□ -2.17
HOXC13P31276 AC245047.3-201ENST00000429428 127 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 AF228730.3-201ENST00000436691 102 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 AL606517.2-201ENST00000442855 241 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 AC097462.1-201ENST00000514125 324 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 RNU6-365P-201ENST00000517113 106 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 RNU6-1270P-201ENST00000517128 108 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 AC097639.2-201ENST00000603159 172 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 MIR8065-201ENST00000620577 100 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 AC106754.2-201ENST00000623006 233 ntBASIC1.48□□□□□ -2.17
HOXC13P31276 Y_RNA.66-201ENST00000362862 102 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 RNA5SP259-201ENST00000365541 109 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 Y_RNA.369-201ENST00000365568 117 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 Y_RNA.528-201ENST00000384575 108 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 Y_RNA.549-201ENST00000384657 102 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 RNU6-1031P-201ENST00000384773 107 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 MIR562-201ENST00000384894 95 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 MIR624-201ENST00000385217 97 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 SNORA26-201ENST00000391286 122 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 MTATP6P21-201ENST00000440681 189 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 HMGN2P32-201ENST00000444648 269 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 AC233266.1-201ENST00000454518 96 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 SNORA31.10-201ENST00000516482 106 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 RNU6-1096P-201ENST00000517089 102 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXC13P31276 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HOXC13P31276 AC242852.1-201ENST00000612151 96 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 AC244015.1-201ENST00000622301 99 ntBASIC1.47□□□□□ -2.17
HOXC13P31276 SNORD73B-201ENST00000364394 72 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 RNU6-1107P-201ENST00000364817 104 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 SNORD61-201ENST00000384252 73 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 SNORD72-201ENST00000390994 80 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 AL034345.1-201ENST00000407768 123 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 NDUFA4P2-201ENST00000489989 244 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 Y_RNA.666-201ENST00000516187 112 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 RNU6-504P-201ENST00000516568 104 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 RNU7-128P-201ENST00000517247 62 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 AC019288.1-201ENST00000557918 224 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 AC007012.1-201ENST00000567192 175 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 AL365205.2-201ENST00000594586 68 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 AC021506.2-201ENST00000612354 169 ntBASIC1.46□□□□□ -2.18
HOXC13P31276 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
HOXC13P31276 RNU6-1138P-201ENST00000365359 106 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 Y_RNA.366-201ENST00000365540 102 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 RNU6-905P-201ENST00000384434 107 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 SNORD12C-201ENST00000386307 89 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 CALM2P4-201ENST00000430810 426 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 PGBD4P5-201ENST00000445958 426 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 RNU6-693P-201ENST00000516134 107 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 RNU6-412P-201ENST00000516434 106 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 RNU6-1291P-201ENST00000516591 104 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 RNU6-1149P-201ENST00000516810 97 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 SUMO2P16-201ENST00000519475 264 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 MIR4662B-201ENST00000579498 81 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 AC073413.2-201ENST00000604332 360 ntBASIC1.45□□□□□ -2.18
HOXC13P31276 AC018630.2-201ENST00000534866 2403 ntBASIC1.44□□□□□ -2.18
HOXC13P31276 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
HOXC13P31276 SNORA63.5-201ENST00000363548 123 ntBASIC1.44□□□□□ -2.18
HOXC13P31276 Y_RNA.281-201ENST00000364774 94 ntBASIC1.44□□□□□ -2.18
HOXC13P31276 RNU6-1131P-201ENST00000364955 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms