Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 Vault.3-201ENST00000516676 95 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AP002963.1-201ENST00000530590 184 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AC093783.1-201ENST00000612976 329 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AL121895.2-201ENST00000619558 447 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.12□□□□□ -2.59
SPTA1P02549 AC097635.1-201ENST00000450678 155 ntBASIC-1.12□□□□□ -2.59
SPTA1P02549 RNU6-625P-201ENST00000459412 107 ntBASIC-1.12□□□□□ -2.59
SPTA1P02549 MIR4460-201ENST00000577862 86 ntBASIC-1.12□□□□□ -2.59
SPTA1P02549 AC124312.5-201ENST00000604451 268 ntBASIC-1.12□□□□□ -2.59
SPTA1P02549 AL158063.1-201ENST00000615349 536 ntBASIC-1.12□□□□□ -2.59
SPTA1P02549 AL607023.1-201ENST00000620045 248 ntBASIC-1.12□□□□□ -2.59
SPTA1P02549 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.12□□□□□ -2.59
SPTA1P02549 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.12□□□□□ -2.59
SPTA1P02549 RNA5SP403-201ENST00000363598 108 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 SNORD115-28-201ENST00000363931 81 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 RNU6-533P-201ENST00000384144 107 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 RNU6-429P-201ENST00000384582 108 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.13□□□□□ -2.59
SPTA1P02549 MIR2681-201ENST00000581814 105 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 AC027449.1-201ENST00000608890 407 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 MIR6818-201ENST00000621576 65 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 RNU6-501P-201ENST00000364072 100 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 AC104850.1-201ENST00000435940 476 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 AC093423.1-201ENST00000440817 142 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 AC016550.1-201ENST00000505348 785 ntBASIC-1.13□□□□□ -2.59
SPTA1P02549 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 RNU6-159P-201ENST00000391080 106 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 RNU4-61P-201ENST00000411243 107 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 RNU7-187P-201ENST00000458985 68 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 SNORD11-201ENST00000459124 84 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
SPTA1P02549 AL133173.2-201ENST00000614270 90 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 AC004467.1-201ENST00000615678 330 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 AC009161.2-201ENST00000624626 138 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 snoR1.1-201ENST00000628177 80 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 MIR548A2-201ENST00000384956 97 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 RNU6-192P-201ENST00000391253 100 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 MIR5696-201ENST00000578474 85 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 MIR548AG2-201ENST00000581228 64 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 AL354950.2-201ENST00000617939 290 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 AL669831.3-213ENST00000636676 183 ntBASIC-1.14□□□□□ -2.59
SPTA1P02549 SNORD50.1-201ENST00000362987 71 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 RNU6-82P-201ENST00000363970 107 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 MT-TM-201ENST00000387377 68 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 SNORD61-201ENST00000384252 73 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 SNORA20-201ENST00000384662 132 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 MIR519E-201ENST00000385075 84 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 AC244090.1-201ENST00000441884 93 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 RNU7-167P-201ENST00000459160 62 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.15□□□□□ -2.59
SPTA1P02549 RNU6-412P-201ENST00000516434 106 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 PART1_1.1-201ENST00000611761 217 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 MIR6773-201ENST00000612812 74 ntBASIC-1.15□□□□□ -2.59
SPTA1P02549 RNU6-228P-201ENST00000362700 106 ntBASIC-1.16□□□□□ -2.59
SPTA1P02549 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.16□□□□□ -2.59
SPTA1P02549 RNU6-831P-201ENST00000384548 107 ntBASIC-1.16□□□□□ -2.59
SPTA1P02549 RNU2-51P-201ENST00000410708 197 ntBASIC-1.16□□□□□ -2.59
SPTA1P02549 RNU7-53P-201ENST00000516705 60 ntBASIC-1.16□□□□□ -2.59
SPTA1P02549 SNORD36C-201ENST00000516733 66 ntBASIC-1.16□□□□□ -2.59
SPTA1P02549 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 SNORD116.1-201ENST00000365628 92 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 RNU6-318P-201ENST00000384283 103 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 MIR599-201ENST00000385069 95 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 AC127455.1-201ENST00000565496 145 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 AC145350.1-201ENST00000567426 208 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 RN7SKP299-201ENST00000606679 301 ntBASIC-1.16□□□□□ -2.6
SPTA1P02549 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 BX295541.1-201ENST00000417774 250 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.17□□□□□ -2.6
SPTA1P02549 AC098826.2-201ENST00000452011 651 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 AC097510.1-201ENST00000510945 133 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 MIR3672-201ENST00000584290 82 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 MIR4424-201ENST00000585257 86 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 AL008718.3-201ENST00000610217 321 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 AC011476.5-201ENST00000615594 130 ntBASIC-1.17□□□□□ -2.6
SPTA1P02549 SNORD115-47-201ENST00000391226 86 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms