Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 Y_RNA.170-201ENST00000363746 110 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 Y_RNA.251-201ENST00000364551 99 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 Y_RNA.351-201ENST00000365436 96 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 MIR1302-7-201ENST00000408841 72 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 AL035398.1-201ENST00000430869 322 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 RNU7-73P-201ENST00000458743 63 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 SNORA31.2-201ENST00000516019 134 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 SNORA31.4-201ENST00000516049 129 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 AC112693.2-201ENST00000556538 232 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.21□□□□□ -2.22
ZIC3O60481 MTND5P32-201ENST00000560711 1802 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 RNA5SP264-201ENST00000363115 107 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 SNORA25.3-201ENST00000363205 127 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 RNU6-913P-201ENST00000390913 95 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.2□□□□□ -2.22
ZIC3O60481 MIR1185-1-201ENST00000408598 86 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 RNU7-197P-201ENST00000458836 62 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 snoU13.16-201ENST00000459350 104 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 RNU7-80P-201ENST00000459562 61 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 RNU7-53P-201ENST00000516705 60 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.2□□□□□ -2.22
ZIC3O60481 MIR548AO-201ENST00000579992 96 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.2□□□□□ -2.22
ZIC3O60481 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
ZIC3O60481 Y_RNA.363-201ENST00000365529 113 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 Y_RNA.400-201ENST00000383963 111 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 RNU6-321P-201ENST00000410912 106 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 AL392103.1-201ENST00000447000 198 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 RNU2-11P-201ENST00000459191 187 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 TRMT112P2-201ENST00000512910 132 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 RNU7-200P-201ENST00000516105 62 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 RNA5SP236-201ENST00000516169 116 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 RNU2-60P-201ENST00000517290 128 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 AC091932.4-201ENST00000623386 200 ntBASIC1.19□□□□□ -2.22
ZIC3O60481 Y_RNA.454-201ENST00000384224 113 ntBASIC1.18□□□□□ -2.22
ZIC3O60481 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
ZIC3O60481 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
ZIC3O60481 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
ZIC3O60481 AL359821.1-201ENST00000605519 182 ntBASIC1.18□□□□□ -2.22
ZIC3O60481 MIR8055-201ENST00000610739 97 ntBASIC1.18□□□□□ -2.22
ZIC3O60481 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
ZIC3O60481 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZIC3O60481 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZIC3O60481 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.18□□□□□ -2.22
ZIC3O60481 MIR342-201ENST00000362212 99 ntBASIC1.17□□□□□ -2.22
ZIC3O60481 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
ZIC3O60481 Y_RNA.215-201ENST00000364204 112 ntBASIC1.17□□□□□ -2.22
ZIC3O60481 RNU6-1062P-201ENST00000383908 107 ntBASIC1.17□□□□□ -2.22
ZIC3O60481 Y_RNA.506-201ENST00000384494 102 ntBASIC1.17□□□□□ -2.22
ZIC3O60481 Y_RNA.584-201ENST00000391090 114 ntBASIC1.17□□□□□ -2.22
ZIC3O60481 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
ZIC3O60481 MIR7974-201ENST00000615835 79 ntBASIC1.17□□□□□ -2.22
ZIC3O60481 MIR103A2-201ENST00000362154 78 ntBASIC1.16□□□□□ -2.22
ZIC3O60481 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
ZIC3O60481 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.16□□□□□ -2.22
ZIC3O60481 RNU11-2P-201ENST00000516898 142 ntBASIC1.16□□□□□ -2.22
ZIC3O60481 MIR548X2-201ENST00000579776 100 ntBASIC1.16□□□□□ -2.22
ZIC3O60481 AL020996.3-201ENST00000606617 222 ntBASIC1.16□□□□□ -2.22
ZIC3O60481 AL596211.1-201ENST00000569873 2277 ntBASIC1.15□□□□□ -2.22
ZIC3O60481 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.22
ZIC3O60481 MIR302B-201ENST00000362188 73 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 Y_RNA.120-201ENST00000363304 110 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 RNU1-133P-201ENST00000364867 167 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 RNY1P5-201ENST00000383890 115 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 MIR569-201ENST00000385228 96 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 SNORA75.2-201ENST00000391138 150 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 SNORA75.3-201ENST00000391231 150 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 RNU6-955P-201ENST00000410497 104 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 RNU6-1190P-201ENST00000410811 104 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 AC090844.1-201ENST00000422019 156 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 RNU7-70P-201ENST00000516941 66 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.15□□□□□ -2.23
ZIC3O60481 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.15□□□□□ -2.23
ZIC3O60481 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 AL022345.2-201ENST00000606307 135 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 Z97988.1-201ENST00000637697 135 ntBASIC1.15□□□□□ -2.23
ZIC3O60481 RNY1P10-201ENST00000363268 113 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 Y_RNA.226-201ENST00000364337 114 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 Y_RNA.327-201ENST00000365201 102 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 RNU6-460P-201ENST00000391158 108 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 SNORA26.6-201ENST00000391256 115 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 MIR513C-201ENST00000401352 84 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 HMGN1P33-201ENST00000432945 451 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 RNU7-45P-201ENST00000459460 63 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 SNORA25.12-201ENST00000516202 82 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 Y_RNA.686-201ENST00000516548 134 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 SNORA70.22-201ENST00000517160 124 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.14□□□□□ -2.23
ZIC3O60481 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 MIR6516-201ENST00000630554 81 ntBASIC1.14□□□□□ -2.23
ZIC3O60481 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
ZIC3O60481 SNORA25-201ENST00000384384 134 ntBASIC1.13□□□□□ -2.23
ZIC3O60481 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
ZIC3O60481 AL603914.1-201ENST00000401964 204 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms