Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.288-201ENST00000364854 92 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORA27-201ENST00000384323 126 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORA26-201ENST00000391286 122 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORD58.1-201ENST00000391313 66 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU7-73P-201ENST00000458743 63 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.668-201ENST00000516233 93 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-958P-201ENST00000516995 106 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 MIR4719-201ENST00000585233 84 ntBASIC0.73□□□□□ -2.29
NEDD8-MDP1E9PL57 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 MIR377-201ENST00000362145 69 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.23-201ENST00000362496 106 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.54-201ENST00000362766 105 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.162-201ENST00000363683 102 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.262-201ENST00000364641 102 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 RNY4P28-201ENST00000365281 93 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 Y_RNA.393-201ENST00000383936 102 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORA1-201ENST00000384107 130 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 SNORA2B-201ENST00000384583 137 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 MIR216A-201ENST00000385063 110 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU2-70P-201ENST00000410718 179 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 RNU6-1110P-201ENST00000516462 101 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
NEDD8-MDP1E9PL57 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-369P-201ENST00000362515 102 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.410-201ENST00000383992 113 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.539-201ENST00000384635 107 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.556-201ENST00000384677 113 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR605-201ENST00000385078 83 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 SNORD77.3-201ENST00000391113 65 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR548H3-201ENST00000408771 118 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 RPS29P24-201ENST00000486345 171 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 AC113410.1-201ENST00000505029 247 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-1045P-201ENST00000516321 107 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 RNY3P16-201ENST00000516338 101 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR376A2-201ENST00000636782 80 ntBASIC0.71□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.199-201ENST00000364014 102 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU4-17P-201ENST00000365598 141 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.440-201ENST00000384120 114 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 SNORD89-201ENST00000390981 114 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU4-43P-201ENST00000410628 137 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 RN7SL793P-201ENST00000583259 296 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 Z97988.1-201ENST00000637697 135 ntBASIC0.7□□□□□ -2.3
NEDD8-MDP1E9PL57 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.20-201ENST00000362479 113 ntBASIC0.69□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-205P-201ENST00000390858 107 ntBASIC0.69□□□□□ -2.3
NEDD8-MDP1E9PL57 snoU13.21-201ENST00000459368 105 ntBASIC0.69□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.680-201ENST00000516441 93 ntBASIC0.69□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR4264-201ENST00000583520 66 ntBASIC0.69□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR6779-201ENST00000617283 64 ntBASIC0.69□□□□□ -2.3
NEDD8-MDP1E9PL57 AC099654.10-201ENST00000640395 161 ntBASIC0.69□□□□□ -2.3
NEDD8-MDP1E9PL57 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-728P-201ENST00000365375 104 ntBASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-1189P-201ENST00000383958 107 ntBASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 HMGN1P33-201ENST00000432945 451 ntBASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-998P-201ENST00000515894 101 ntBASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 AC025627.3-201ENST00000582078 182 ntBASIC0.68□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-103P-201ENST00000363686 107 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.477-201ENST00000384352 108 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 RNY1P4-201ENST00000384595 115 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-994P-201ENST00000410507 111 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 AL138752.1-201ENST00000452964 351 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU2-11P-201ENST00000459191 187 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU7-96P-201ENST00000459535 64 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU7-53P-201ENST00000516705 60 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR4744-201ENST00000581563 82 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 AP000753.3-201ENST00000604083 169 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 uc_338.6-201ENST00000613544 171 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 7SK.10-201ENST00000621414 298 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
NEDD8-MDP1E9PL57 SNORD27-201ENST00000363981 72 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.308-201ENST00000365043 101 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 Y_RNA.350-201ENST00000365409 98 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR1302-3-201ENST00000408128 138 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-1190P-201ENST00000410811 104 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 RNU6-602P-201ENST00000411155 105 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 AC067940.1-201ENST00000458411 300 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR3128-201ENST00000581957 66 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR4503-201ENST00000582187 83 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 AC062037.2-201ENST00000610137 73 ntBASIC0.66□□□□□ -2.3
NEDD8-MDP1E9PL57 MIR6513-201ENST00000621188 64 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms