Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 Y_RNA.420-201ENST00000384043 110 ntBASIC2.01□□□□□ -2.09
CCDC85CA6NKD9 SNORA70.7-201ENST00000384159 133 ntBASIC2.01□□□□□ -2.09
CCDC85CA6NKD9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.01□□□□□ -2.09
CCDC85CA6NKD9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.01□□□□□ -2.09
CCDC85CA6NKD9 RNU6-998P-201ENST00000515894 101 ntBASIC2.01□□□□□ -2.09
CCDC85CA6NKD9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC85CA6NKD9 MIR520C-201ENST00000385005 87 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 RNU6-460P-201ENST00000391158 108 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 MTATP6P21-201ENST00000440681 189 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 RNU7-80P-201ENST00000459562 61 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 SNORD111.1-201ENST00000516421 86 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 RNA5SP476-201ENST00000516613 103 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 RN7SL793P-201ENST00000583259 296 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 MIR151B-201ENST00000584249 96 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 AC008133.2-201ENST00000624540 351 ntBASIC2□□□□□ -2.09
CCDC85CA6NKD9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC85CA6NKD9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 Y_RNA.454-201ENST00000384224 113 ntBASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 RPS29P29-201ENST00000456396 171 ntBASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 Y_RNA.681-201ENST00000516445 113 ntBASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 AC024614.2-201ENST00000577584 372 ntBASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 MIR4421-201ENST00000578133 69 ntBASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 MIR3664-201ENST00000579074 99 ntBASIC1.99□□□□□ -2.09
CCDC85CA6NKD9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 U8.1-201ENST00000362843 134 ntBASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 HAR1A.1-201ENST00000459583 118 ntBASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 RNA5SP436-201ENST00000516020 115 ntBASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 RNU6-902P-201ENST00000517212 91 ntBASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 MIR3937-201ENST00000580135 106 ntBASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 AP001485.1-201ENST00000604799 199 ntBASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 MIR4791-201ENST00000607666 84 ntBASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC85CA6NKD9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 SNORA40-201ENST00000388090 126 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 Y_RNA.586-201ENST00000391146 98 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 RNU6-257P-201ENST00000410238 98 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 RPS27P16-201ENST00000425758 201 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 TMSB4XP3-201ENST00000445144 114 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 RNU7-73P-201ENST00000458743 63 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 AC019176.1-201ENST00000518519 225 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 AP001328.1-201ENST00000528550 176 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 AC243994.1-201ENST00000618627 109 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 MIR6788-201ENST00000618842 66 ntBASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC85CA6NKD9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 MIRLET7G-201ENST00000362280 84 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 RNA5SP48-201ENST00000363969 126 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 RNU6-60P-201ENST00000364792 103 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 RNU6-915P-201ENST00000364943 103 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 SNORD18B-201ENST00000365659 72 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 MTND4LP9-201ENST00000427694 174 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 AL035398.1-201ENST00000430869 322 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 Y_RNA.686-201ENST00000516548 134 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 RNU6-113P-201ENST00000516653 101 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 RNU7-53P-201ENST00000516705 60 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 AL512310.8-201ENST00000550183 120 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 U7.2-201ENST00000607576 63 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 AL096861.1-201ENST00000610899 123 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 AC011603.4-201ENST00000611325 277 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 AC091932.4-201ENST00000623386 200 ntBASIC1.96□□□□□ -2.1
CCDC85CA6NKD9 SNORA51.10-201ENST00000384418 136 ntBASIC1.95□□□□□ -2.1
CCDC85CA6NKD9 MIR548J-201ENST00000408833 112 ntBASIC1.95□□□□□ -2.1
CCDC85CA6NKD9 RNU6-165P-201ENST00000517170 99 ntBASIC1.95□□□□□ -2.1
CCDC85CA6NKD9 TUG1_4.1-201ENST00000619464 181 ntBASIC1.95□□□□□ -2.1
CCDC85CA6NKD9 AL353770.2-201ENST00000620024 78 ntBASIC1.95□□□□□ -2.1
CCDC85CA6NKD9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC85CA6NKD9 ZNF209P-201ENST00000593450 2304 ntBASIC1.95□□□□□ -2.1
CCDC85CA6NKD9 RNU1-93P-201ENST00000364704 169 ntBASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 Y_RNA.280-201ENST00000364765 112 ntBASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 snoU13.16-201ENST00000459350 104 ntBASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 RNU7-41P-201ENST00000515917 61 ntBASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 MIR6078-201ENST00000611069 100 ntBASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.94□□□□□ -2.1
CCDC85CA6NKD9 RNU1-133P-201ENST00000364867 167 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 RNU6-81P-201ENST00000365608 104 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 Y_RNA.651-201ENST00000459380 103 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 AC079804.2-201ENST00000490376 200 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 AC090255.1-201ENST00000495779 349 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 RNA5SP272-201ENST00000516095 111 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 RNA5SP395-201ENST00000516567 118 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 Y_RNA.690-201ENST00000516603 95 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 Y_RNA.692-201ENST00000516627 105 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 MIR3910-1-201ENST00000580936 111 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 MIR3192-201ENST00000584920 77 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 MIR4251-201ENST00000635819 61 ntBASIC1.93□□□□□ -2.1
CCDC85CA6NKD9 SNORA20-201ENST00000384662 132 ntBASIC1.92□□□□□ -2.1
CCDC85CA6NKD9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC85CA6NKD9 SNORA67.6-201ENST00000391093 99 ntBASIC1.92□□□□□ -2.1
CCDC85CA6NKD9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC85CA6NKD9 RPL39P39-201ENST00000455840 151 ntBASIC1.92□□□□□ -2.1
CCDC85CA6NKD9 SNORA31.4-201ENST00000516049 129 ntBASIC1.92□□□□□ -2.1
CCDC85CA6NKD9 MIR3121-201ENST00000579680 77 ntBASIC1.92□□□□□ -2.1
CCDC85CA6NKD9 MIR570-201ENST00000384917 97 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms