Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 SNORA19.1-201ENST00000410656 129 ntBASIC2.74□□□□□ -1.97
USP17L3A6NCW0 RPS3AP1-201ENST00000413190 320 ntBASIC2.74□□□□□ -1.97
USP17L3A6NCW0 RNU6-322P-201ENST00000516010 103 ntBASIC2.74□□□□□ -1.97
USP17L3A6NCW0 RNU6-917P-201ENST00000516294 104 ntBASIC2.74□□□□□ -1.97
USP17L3A6NCW0 RNU6-1258P-201ENST00000516911 111 ntBASIC2.74□□□□□ -1.97
USP17L3A6NCW0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
USP17L3A6NCW0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
USP17L3A6NCW0 Y_RNA.155-201ENST00000363632 101 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 SNORA1.1-201ENST00000364671 133 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 RNU6-203P-201ENST00000384038 104 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 SNORD23.1-201ENST00000408212 104 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 SNORA72.7-201ENST00000516349 94 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 RNU6-158P-201ENST00000517104 100 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 MIR548AE2-201ENST00000583456 67 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 AC008133.2-201ENST00000624540 351 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 MIR2052-201ENST00000636055 55 ntBASIC2.73□□□□□ -1.97
USP17L3A6NCW0 RNA5SP99-201ENST00000364020 114 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 RNU4-67P-201ENST00000364569 141 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 RNU6-409P-201ENST00000384114 104 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 Y_RNA.470-201ENST00000384307 117 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 SNORA67.3-201ENST00000384366 140 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 AC004965.1-201ENST00000413033 213 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 SUMO1P4-201ENST00000429430 302 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.72□□□□□ -1.97
USP17L3A6NCW0 AC011753.1-201ENST00000451001 220 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 RNU6-109P-201ENST00000516364 107 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 RNU6-184P-201ENST00000516514 107 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 DEFB131E-201ENST00000532329 154 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 MIR4764-201ENST00000580680 88 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 MIR1255B1-201ENST00000636325 63 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 MIR219B-201ENST00000637023 88 ntBASIC2.72□□□□□ -1.97
USP17L3A6NCW0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
USP17L3A6NCW0 RNU6-363P-201ENST00000362895 105 ntBASIC2.71□□□□□ -1.98
USP17L3A6NCW0 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.71□□□□□ -1.98
USP17L3A6NCW0 RNU6-733P-201ENST00000410759 104 ntBASIC2.71□□□□□ -1.98
USP17L3A6NCW0 AL603825.1-201ENST00000438481 80 ntBASIC2.71□□□□□ -1.98
USP17L3A6NCW0 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
USP17L3A6NCW0 Y_RNA.773-201ENST00000607168 90 ntBASIC2.71□□□□□ -1.98
USP17L3A6NCW0 MIR6766-201ENST00000622641 72 ntBASIC2.71□□□□□ -1.98
USP17L3A6NCW0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
USP17L3A6NCW0 Y_RNA.10-201ENST00000362371 110 ntBASIC2.7□□□□□ -1.98
USP17L3A6NCW0 MIR194-1-201ENST00000384892 85 ntBASIC2.7□□□□□ -1.98
USP17L3A6NCW0 MIR520C-201ENST00000385005 87 ntBASIC2.7□□□□□ -1.98
USP17L3A6NCW0 RNA5SP212-201ENST00000391223 107 ntBASIC2.7□□□□□ -1.98
USP17L3A6NCW0 RN7SL499P-201ENST00000481141 276 ntBASIC2.7□□□□□ -1.98
USP17L3A6NCW0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.7□□□□□ -1.98
USP17L3A6NCW0 HMGN1P33-201ENST00000432945 451 ntBASIC2.69□□□□□ -1.98
USP17L3A6NCW0 MIR4694-201ENST00000578534 80 ntBASIC2.69□□□□□ -1.98
USP17L3A6NCW0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.69□□□□□ -1.98
USP17L3A6NCW0 RNA5SP276-201ENST00000362580 94 ntBASIC2.68□□□□□ -1.98
USP17L3A6NCW0 RNY3P2-201ENST00000362918 102 ntBASIC2.68□□□□□ -1.98
USP17L3A6NCW0 Y_RNA.93-201ENST00000363066 109 ntBASIC2.68□□□□□ -1.98
USP17L3A6NCW0 Y_RNA.107-201ENST00000363190 121 ntBASIC2.68□□□□□ -1.98
USP17L3A6NCW0 SNORA67.1-201ENST00000364749 141 ntBASIC2.68□□□□□ -1.98
USP17L3A6NCW0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.68□□□□□ -1.98
USP17L3A6NCW0 AL451046.2-201ENST00000403074 277 ntBASIC2.68□□□□□ -1.98
USP17L3A6NCW0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
USP17L3A6NCW0 RNU6-548P-201ENST00000517083 115 ntBASIC2.68□□□□□ -1.98
USP17L3A6NCW0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
USP17L3A6NCW0 Y_RNA.360-201ENST00000365512 102 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 MIR513A1-201ENST00000385138 129 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 MIR653-201ENST00000385279 96 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 JTBP1-201ENST00000441314 247 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 HMGN2P23-201ENST00000456759 269 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 RPL23AP42-201ENST00000471152 471 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 SCARNA23-201ENST00000516060 130 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 RNA5SP200-201ENST00000516360 103 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 SNORA31.15-201ENST00000516771 132 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 MIR8055-201ENST00000610739 97 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 AL353997.5-201ENST00000618886 171 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 AC131280.1-202ENST00000624067 4211 ntBASIC2.67□□□□□ -1.98
USP17L3A6NCW0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP17L3A6NCW0 RNU6-1099P-201ENST00000363533 107 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 RNU6-1131P-201ENST00000364955 107 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 RNA5SP259-201ENST00000365541 109 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 DEFA7P-201ENST00000382676 285 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 SNORA32-201ENST00000384072 121 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 RNU6-616P-201ENST00000384353 107 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 MTATP8P2-201ENST00000435212 202 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 CYP3A52P-201ENST00000563326 91 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 Z97988.1-201ENST00000637697 135 ntBASIC2.66□□□□□ -1.98
USP17L3A6NCW0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
USP17L3A6NCW0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USP17L3A6NCW0 Y_RNA.601-201ENST00000410500 113 ntBASIC2.65□□□□□ -1.99
USP17L3A6NCW0 AL161935.2-201ENST00000414627 60 ntBASIC2.65□□□□□ -1.99
USP17L3A6NCW0 MIR6132-201ENST00000622083 109 ntBASIC2.65□□□□□ -1.99
USP17L3A6NCW0 SNORA7.5-201ENST00000410672 110 ntBASIC2.64□□□□□ -1.99
USP17L3A6NCW0 MIR4251-201ENST00000635819 61 ntBASIC2.64□□□□□ -1.99
USP17L3A6NCW0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USP17L3A6NCW0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
USP17L3A6NCW0 RNU6-832P-201ENST00000363319 107 ntBASIC2.63□□□□□ -1.99
USP17L3A6NCW0 Y_RNA.220-201ENST00000364244 109 ntBASIC2.63□□□□□ -1.99
USP17L3A6NCW0 RNU6-294P-201ENST00000364999 102 ntBASIC2.63□□□□□ -1.99
USP17L3A6NCW0 AC245047.7-201ENST00000440265 293 ntBASIC2.63□□□□□ -1.99
USP17L3A6NCW0 SNORD111.1-201ENST00000516421 86 ntBASIC2.63□□□□□ -1.99
USP17L3A6NCW0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.63□□□□□ -1.99
USP17L3A6NCW0 SNORA6-201ENST00000384033 151 ntBASIC2.62□□□□□ -1.99
USP17L3A6NCW0 MIR605-201ENST00000385078 83 ntBASIC2.62□□□□□ -1.99
USP17L3A6NCW0 MIR577-201ENST00000385196 96 ntBASIC2.62□□□□□ -1.99
USP17L3A6NCW0 AC244636.1-201ENST00000421152 228 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms