Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MT-TN-201ENST00000387400 73 ntBASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 RNU2-70P-201ENST00000410718 179 ntBASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 AC087499.4-201ENST00000448505 178 ntBASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-1299P-201ENST00000516316 100 ntBASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 SNORA18.4-201ENST00000516440 124 ntBASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 AP000942.4-201ENST00000604811 241 ntBASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 U6.104-201ENST00000637979 90 ntBASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 MIR1-1-201ENST00000362147 71 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 SNORA63-201ENST00000363450 132 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.326-201ENST00000365176 113 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 SNORD24-201ENST00000383884 75 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-1160P-201ENST00000384546 104 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 MIR489-201ENST00000384923 84 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 MIR548A2-201ENST00000384956 97 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 MT-TW-201ENST00000387382 68 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 AC090844.1-201ENST00000422019 156 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-126P-201ENST00000516685 103 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 SNORD36C-201ENST00000516733 66 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 MIR8062-201ENST00000621515 85 ntBASIC0.65□□□□□ -2.31
ATG4BQ9Y4P1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 MIR377-201ENST00000362145 69 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 SNORD45.3-201ENST00000363836 72 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 SNORA24-201ENST00000384096 131 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 SNORA27-201ENST00000384323 126 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 MIR606-201ENST00000384851 96 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 SNORA40.5-201ENST00000391061 128 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 MIR1827-201ENST00000408549 66 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-938P-201ENST00000411285 103 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 AL138752.1-201ENST00000452964 351 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 snoU13.21-201ENST00000459368 105 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-504P-201ENST00000516568 104 ntBASIC0.64□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-888P-201ENST00000363010 101 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 RNY1-201ENST00000364228 113 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 snoU2_19.4-201ENST00000364329 80 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.432-201ENST00000384087 111 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.574-201ENST00000384766 95 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 MIR613-201ENST00000385248 95 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 SNORA26-201ENST00000391286 122 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 AL606845.1-201ENST00000404881 255 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 SNORD83.1-201ENST00000411362 77 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 SNORD2.1-201ENST00000458762 69 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-453P-201ENST00000516819 85 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 AC011195.1-201ENST00000578177 177 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 MIR4264-201ENST00000583520 66 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 AC008737.2-201ENST00000599446 118 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 MIR6515-201ENST00000619843 57 ntBASIC0.63□□□□□ -2.31
ATG4BQ9Y4P1 MIR335-201ENST00000362173 94 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 MIR342-201ENST00000362212 99 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.7-201ENST00000362352 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.54-201ENST00000362766 105 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.82-201ENST00000363000 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.92-201ENST00000363043 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.235-201ENST00000364412 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.306-201ENST00000365015 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.312-201ENST00000365089 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.322-201ENST00000365151 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-580P-201ENST00000365159 107 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 SNORD105-201ENST00000386910 85 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-913P-201ENST00000390913 95 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 HMGN1P33-201ENST00000432945 451 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 AF228730.3-201ENST00000436691 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.650-201ENST00000459002 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 RPS29P24-201ENST00000486345 171 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 RNU7-53P-201ENST00000516705 60 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.777-201ENST00000516982 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 AL442663.2-201ENST00000554385 511 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.771-201ENST00000598668 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.789-201ENST00000622480 102 ntBASIC0.62□□□□□ -2.31
ATG4BQ9Y4P1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.66-201ENST00000362862 102 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 RNU1-133P-201ENST00000364867 167 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-934P-201ENST00000365154 107 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-484P-201ENST00000384016 107 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 RNU6-1228P-201ENST00000391014 107 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 SNRPGP8-201ENST00000454064 226 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 RNU7-62P-201ENST00000458856 62 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 MIR4771-2-201ENST00000577758 74 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 MIR4771-1-201ENST00000582617 74 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 AL365265.1-201ENST00000621045 234 ntBASIC0.61□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.176-201ENST00000363815 109 ntBASIC0.6□□□□□ -2.31
ATG4BQ9Y4P1 Y_RNA.396-201ENST00000383949 103 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms