Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 RNU6-21P-201ENST00000384710 107 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 SNORD116-6-201ENST00000384711 96 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 RNU6-291P-201ENST00000384720 107 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 MIR7-2-201ENST00000384970 110 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 U8.15-201ENST00000390947 134 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 RNU6-269P-201ENST00000391077 97 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 RNU6-383P-201ENST00000410864 94 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 MIR3152-201ENST00000579801 74 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 AL133255.1-201ENST00000606374 441 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 AC006157.1-201ENST00000611750 366 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 MIR342-201ENST00000362212 99 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 SNORD114-31-201ENST00000363219 75 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 RNU6-899P-201ENST00000363947 107 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 RNU6-535P-201ENST00000384722 107 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 MIR196A2-201ENST00000385189 110 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 AC096531.1-201ENST00000419107 107 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 RNU7-96P-201ENST00000459535 64 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 RNU6-765P-201ENST00000516916 99 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 MIR5690-201ENST00000583739 73 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 MIR3925-201ENST00000584674 77 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 AC010205.1-201ENST00000616668 449 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 AL662814.1-201ENST00000617364 121 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 MIR6759-201ENST00000638110 65 ntBASIC-0.47□□□□□ -2.48
VAPAQ9P0L0 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 RNU6-998P-201ENST00000515894 101 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 RNU6-180P-201ENST00000516697 61 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 MTND5P34-201ENST00000568888 325 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 MIR4491-201ENST00000581087 68 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 VN1R91P-201ENST00000594377 169 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 AC124312.5-201ENST00000604451 268 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 AL442067.1-201ENST00000613261 223 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 U4.5-201ENST00000617137 123 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 AC048344.4-201ENST00000619744 527 ntBASIC-0.48□□□□□ -2.49
VAPAQ9P0L0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 RNU6-144P-201ENST00000383951 107 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 RNA5SP300-201ENST00000391197 107 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 AC010655.3-201ENST00000478818 450 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 RNU2-31P-201ENST00000516954 155 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 IGLVI-20-201ENST00000519296 130 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 MIR4645-201ENST00000583158 77 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 AL021707.8-201ENST00000609428 183 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 SNORA70.25-201ENST00000612741 95 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 MIR6514-201ENST00000622549 70 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 MIR6717-201ENST00000622747 73 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 AC099654.14-201ENST00000638599 341 ntBASIC-0.49□□□□□ -2.49
VAPAQ9P0L0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 MIR548A2-201ENST00000384956 97 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 AL160004.2-201ENST00000432935 350 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 AC099799.1-201ENST00000439809 192 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 RNU7-45P-201ENST00000459460 63 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 RNA5SP285-201ENST00000516619 119 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 MIR4662B-201ENST00000579498 81 ntBASIC-0.5□□□□□ -2.49
VAPAQ9P0L0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 RNU4-24P-201ENST00000364565 139 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 RNU6-597P-201ENST00000365620 102 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 SNORD61-201ENST00000384252 73 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 RNU6-937P-201ENST00000384325 106 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 RNU6-480P-201ENST00000384332 107 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 MTATP6P26-201ENST00000445926 662 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 RNU6-718P-201ENST00000516166 105 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 RNU6-897P-201ENST00000517135 105 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 AC100767.1-201ENST00000528178 123 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 AC002553.4-201ENST00000616896 331 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 MIR4788-201ENST00000639104 80 ntBASIC-0.51□□□□□ -2.49
VAPAQ9P0L0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 MIR302B-201ENST00000362188 73 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 SNORD49B-201ENST00000365172 72 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 RNY3-201ENST00000365484 102 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 SNORD24-201ENST00000383884 75 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 SNORA26.6-201ENST00000391256 115 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 RPL21P38-201ENST00000418090 167 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 HMGN2P22-201ENST00000427588 175 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 SNORD77.4-201ENST00000516158 81 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 RNU2-60P-201ENST00000517290 128 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 MIR3666-201ENST00000607845 111 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.52□□□□□ -2.49
VAPAQ9P0L0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.53□□□□□ -2.49
VAPAQ9P0L0 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.53□□□□□ -2.49
VAPAQ9P0L0 RNU6-653P-201ENST00000363074 106 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 279.1 ms