Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 MTND1P7-201ENST00000632801 297 ntBASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.35□□□□□ -2.19
SMARCAL1Q9NZC9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.215-201ENST00000364204 112 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 RNU6-1189P-201ENST00000383958 107 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.400-201ENST00000383963 111 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 MIR624-201ENST00000385217 97 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 SNX2P2-201ENST00000424553 323 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 RPS26P48-201ENST00000491713 339 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 SNORA25.12-201ENST00000516202 82 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 AL513534.2-201ENST00000603836 250 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.34□□□□□ -2.19
SMARCAL1Q9NZC9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.2
SMARCAL1Q9NZC9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-1292P-201ENST00000383856 107 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-187P-201ENST00000384139 106 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.497-201ENST00000384447 98 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 SNORA20-201ENST00000384662 132 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 AC087499.4-201ENST00000448505 178 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-947P-201ENST00000516264 106 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 MIR4764-201ENST00000580680 88 ntBASIC1.33□□□□□ -2.2
SMARCAL1Q9NZC9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 MTND5P32-201ENST00000560711 1802 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.52-201ENST00000362760 96 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.251-201ENST00000364551 99 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.440-201ENST00000384120 114 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 MIR520C-201ENST00000385005 87 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 RPS27P16-201ENST00000425758 201 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 AC009474.2-201ENST00000451383 136 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 RNU7-197P-201ENST00000458836 62 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 MIR5197-201ENST00000583721 112 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 GHRLOS.1-201ENST00000610995 70 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.32□□□□□ -2.2
SMARCAL1Q9NZC9 MIR342-201ENST00000362212 99 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 RNY1P5-201ENST00000383890 115 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 SNORA27-201ENST00000384323 126 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.488-201ENST00000384403 102 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 SNORA40.5-201ENST00000391061 128 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-460P-201ENST00000391158 108 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 MIR513C-201ENST00000401352 84 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 MIR548M-201ENST00000408260 86 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 RNU7-41P-201ENST00000515917 61 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD111.1-201ENST00000516421 86 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-426P-201ENST00000516464 97 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-1149P-201ENST00000516810 97 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 MIR548X2-201ENST00000579776 100 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 MIR3192-201ENST00000584920 77 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 MIR4781-201ENST00000585250 76 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 AL096861.1-201ENST00000610899 123 ntBASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.31□□□□□ -2.2
SMARCAL1Q9NZC9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-34-201ENST00000362441 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-12-201ENST00000362583 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-29-201ENST00000362834 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-9-201ENST00000362912 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-21-201ENST00000362963 81 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-14-201ENST00000363090 81 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-508P-201ENST00000363231 103 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 RNY1P10-201ENST00000363268 113 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-13-201ENST00000363358 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-41-201ENST00000363608 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-11-201ENST00000363616 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-5-201ENST00000363633 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-39-201ENST00000363694 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-4-201ENST00000363810 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-16-201ENST00000363887 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-6-201ENST00000363942 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-42-201ENST00000364273 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-15-201ENST00000364809 81 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-1-201ENST00000364961 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-26-201ENST00000365067 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-10-201ENST00000365073 81 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORA1.2-201ENST00000365189 134 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-43-201ENST00000365503 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-36-201ENST00000365629 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-746P-201ENST00000384112 109 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 MIR569-201ENST00000385228 96 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.584-201ENST00000391090 114 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 AC245517.4-201ENST00000448601 281 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.703-201ENST00000516846 111 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SCARNA15-202ENST00000516881 127 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 AC131055.1-201ENST00000584626 316 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD115-40-201ENST00000606510 82 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 MIR4791-201ENST00000607666 84 ntBASIC1.3□□□□□ -2.2
SMARCAL1Q9NZC9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms