Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 RNU6-795P-201ENST00000516323 103 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 RNA5SP33-201ENST00000516687 98 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 RNU7-53P-201ENST00000516705 60 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.41□□□□□ -2.02
SSU72Q9NP77 MIR3152-201ENST00000579801 74 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 MIR4325-201ENST00000583049 90 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 RPL12P50-201ENST00000603116 116 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SSU72Q9NP77 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SSU72Q9NP77 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.02
SSU72Q9NP77 MIR424-201ENST00000362227 98 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 SNORD114-30-201ENST00000364448 72 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 SNORA70.7-201ENST00000384159 133 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 SNORA44-201ENST00000384584 132 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 HMGN1P33-201ENST00000432945 451 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 AC011753.1-201ENST00000451001 220 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 BX510359.1-201ENST00000456973 237 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 AC026421.1-201ENST00000519101 163 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 DNAJC19P9-201ENST00000555084 351 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.4□□□□□ -2.03
SSU72Q9NP77 AL161756.2-201ENST00000604597 246 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 MIR8055-201ENST00000610739 97 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 SNORD3E-202ENST00000627253 216 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 AC091304.10-201ENST00000641554 121 ntBASIC2.4□□□□□ -2.03
SSU72Q9NP77 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSU72Q9NP77 RNU6-170P-201ENST00000362832 104 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 RNU6-644P-201ENST00000391155 98 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 SNORA7.5-201ENST00000410672 110 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 RNA5SP450-201ENST00000411206 102 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 AC096949.1-201ENST00000412047 152 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 RNA5SP367-201ENST00000516557 118 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 RNA5SP481-201ENST00000516814 122 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 MIR4777-201ENST00000583710 86 ntBASIC2.39□□□□□ -2.03
SSU72Q9NP77 RNU6-859P-201ENST00000362728 107 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 RNY1P10-201ENST00000363268 113 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 SNORA3A-201ENST00000364113 130 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 RNA5SP173-201ENST00000364857 136 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSU72Q9NP77 Y_RNA.537-201ENST00000384626 109 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 RNU6-592P-201ENST00000411333 103 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 AC004941.2-201ENST00000427009 228 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 S100A11P2-201ENST00000467589 312 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.38□□□□□ -2.03
SSU72Q9NP77 RNU7-61P-201ENST00000515897 61 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 SNORA74.3-201ENST00000517108 154 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 SNORA31.25-201ENST00000517242 134 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 FAM106DP-201ENST00000586416 501 ntBASIC2.38□□□□□ -2.03
SSU72Q9NP77 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.38□□□□□ -2.03
SSU72Q9NP77 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSU72Q9NP77 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSU72Q9NP77 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSU72Q9NP77 MIRLET7G-201ENST00000362280 84 ntBASIC2.37□□□□□ -2.03
SSU72Q9NP77 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.37□□□□□ -2.03
SSU72Q9NP77 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.37□□□□□ -2.03
SSU72Q9NP77 RN7SKP12-201ENST00000516275 143 ntBASIC2.37□□□□□ -2.03
SSU72Q9NP77 RNU6-521P-201ENST00000516663 105 ntBASIC2.37□□□□□ -2.03
SSU72Q9NP77 SNORA31.17-201ENST00000516953 127 ntBASIC2.37□□□□□ -2.03
SSU72Q9NP77 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
SSU72Q9NP77 FO624990.1-201ENST00000636373 85 ntBASIC2.37□□□□□ -2.03
SSU72Q9NP77 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSU72Q9NP77 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSU72Q9NP77 Y_RNA.10-201ENST00000362371 110 ntBASIC2.36□□□□□ -2.03
SSU72Q9NP77 RNU6-573P-201ENST00000383938 106 ntBASIC2.36□□□□□ -2.03
SSU72Q9NP77 RNU6-1201P-201ENST00000384227 107 ntBASIC2.36□□□□□ -2.03
SSU72Q9NP77 AL359511.1-201ENST00000402970 211 ntBASIC2.36□□□□□ -2.03
SSU72Q9NP77 RNU6-917P-201ENST00000516294 104 ntBASIC2.36□□□□□ -2.03
SSU72Q9NP77 FAM71BP1-201ENST00000604431 523 ntBASIC2.36□□□□□ -2.03
SSU72Q9NP77 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.36□□□□□ -2.03
SSU72Q9NP77 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SSU72Q9NP77 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.35□□□□□ -2.03
SSU72Q9NP77 Y_RNA.377-201ENST00000365644 108 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 RNU6-203P-201ENST00000384038 104 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 SNORA32-201ENST00000384072 121 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 RNU6-1152P-201ENST00000384576 107 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 MIR450A2-201ENST00000385022 100 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 Y_RNA.593-201ENST00000410292 98 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 RPL23AP6-201ENST00000446637 472 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 AC234781.5-201ENST00000508429 271 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 RNU6-1018P-201ENST00000516577 106 ntBASIC2.35□□□□□ -2.03
SSU72Q9NP77 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SSU72Q9NP77 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SSU72Q9NP77 RNU6-342P-201ENST00000384521 104 ntBASIC2.34□□□□□ -2.03
SSU72Q9NP77 RNU6-1307P-201ENST00000391012 103 ntBASIC2.34□□□□□ -2.03
SSU72Q9NP77 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.34□□□□□ -2.03
SSU72Q9NP77 RNA5SP261-201ENST00000410536 106 ntBASIC2.34□□□□□ -2.03
SSU72Q9NP77 RNA5SP270-201ENST00000411361 118 ntBASIC2.34□□□□□ -2.03
SSU72Q9NP77 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.34□□□□□ -2.03
SSU72Q9NP77 RNU6-162P-201ENST00000516228 103 ntBASIC2.34□□□□□ -2.03
SSU72Q9NP77 U7.3-201ENST00000616123 62 ntBASIC2.34□□□□□ -2.03
SSU72Q9NP77 AL590808.1-201ENST00000618696 141 ntBASIC2.34□□□□□ -2.03
SSU72Q9NP77 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSU72Q9NP77 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSU72Q9NP77 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.33□□□□□ -2.04
SSU72Q9NP77 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSU72Q9NP77 RNU6-60P-201ENST00000364792 103 ntBASIC2.33□□□□□ -2.04
SSU72Q9NP77 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 236.6 ms