Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.85-201ENST00000363014 111 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 SNORD114-23-201ENST00000363536 72 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 RNA5SP48-201ENST00000363969 126 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.199-201ENST00000364014 102 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 RNY4P28-201ENST00000365281 93 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.486-201ENST00000384398 107 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 SNORD28B-201ENST00000390993 75 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 RNU6-381P-201ENST00000391259 108 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 MIR548O-201ENST00000408583 114 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 RNU7-90P-201ENST00000459216 62 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 SNORD79.1-201ENST00000516069 84 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 RNU6-693P-201ENST00000516134 107 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 RNU6-1299P-201ENST00000516316 100 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 RNU6-126P-201ENST00000516685 103 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 AL391903.3-201ENST00000612158 163 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
ZNF541Q9H0D2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 SNORA51.10-201ENST00000384418 136 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 SNORA26-201ENST00000391286 122 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 RNU2-70P-201ENST00000410718 179 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 RNU6-1023P-201ENST00000516137 106 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 RNU7-25P-201ENST00000516544 62 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 RNU6-111P-201ENST00000517179 105 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 RNU6-484P-201ENST00000384016 107 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 MIR936-201ENST00000401264 98 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.622-201ENST00000411091 108 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 RNU6-847P-201ENST00000411115 108 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 AC004941.2-201ENST00000427009 228 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 SNRPGP8-201ENST00000454064 226 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 RNU7-67P-201ENST00000459003 62 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 RNU4-57P-201ENST00000515980 135 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 RNA5SP476-201ENST00000516613 103 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 AC007751.1-201ENST00000529260 376 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 AC109810.1-201ENST00000534066 224 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 AC004817.2-201ENST00000561794 651 ntBASIC1.05□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.241-201ENST00000364470 117 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.262-201ENST00000364641 102 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.308-201ENST00000365043 101 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.478-201ENST00000384358 107 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 MIR616-201ENST00000385293 97 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 AL606845.1-201ENST00000404881 255 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.626-201ENST00000411288 95 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 RNU6-561P-201ENST00000516222 102 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 RNU6-504P-201ENST00000516568 104 ntBASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF541Q9H0D2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.03□□□□□ -2.24
ZNF541Q9H0D2 SNORA20.1-201ENST00000364790 130 ntBASIC1.03□□□□□ -2.24
ZNF541Q9H0D2 RNU4-17P-201ENST00000365598 141 ntBASIC1.03□□□□□ -2.24
ZNF541Q9H0D2 MIR548A2-201ENST00000384956 97 ntBASIC1.03□□□□□ -2.24
ZNF541Q9H0D2 SNORA79-201ENST00000408376 140 ntBASIC1.03□□□□□ -2.24
ZNF541Q9H0D2 RNU7-21P-201ENST00000459430 62 ntBASIC1.03□□□□□ -2.24
ZNF541Q9H0D2 Y_RNA.66-201ENST00000362862 102 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 Y_RNA.91-201ENST00000363042 107 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 SNORD115-28-201ENST00000363931 81 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 Y_RNA.537-201ENST00000384626 109 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 SNORA75.2-201ENST00000391138 150 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 SNORA75.3-201ENST00000391231 150 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 MIR942-201ENST00000401111 86 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 AC023827.1-201ENST00000569247 97 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 MIR4308-201ENST00000580634 81 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 MIR4791-201ENST00000607666 84 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 AC243994.1-201ENST00000618627 109 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
ZNF541Q9H0D2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RNA5SP62-201ENST00000363457 110 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 SNORD45.3-201ENST00000363836 72 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 Y_RNA.432-201ENST00000384087 111 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RNY3P5-201ENST00000384127 102 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 SNORD61-201ENST00000384252 73 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 MIR518F-201ENST00000384973 87 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RNU6-1228P-201ENST00000391014 107 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RNU6-493P-201ENST00000391321 108 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RNU2-55P-201ENST00000411146 174 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RPS26P48-201ENST00000491713 339 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RNU6-958P-201ENST00000516995 106 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RNU6-1270P-201ENST00000517128 108 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 AP003716.2-201ENST00000528260 108 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 MIR8087-201ENST00000612745 78 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 SEPT14P17-201ENST00000617978 177 ntBASIC1.01□□□□□ -2.25
ZNF541Q9H0D2 RNU6-923P-201ENST00000364753 107 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 Y_RNA.634-201ENST00000364811 113 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 Y_RNA.494-201ENST00000384432 111 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 270.4 ms