Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SNORA26.6-201ENST00000391256 115 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 RNU6-475P-201ENST00000516073 104 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 SNORA25.16-201ENST00000516741 121 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 RNA5SP330-201ENST00000517096 96 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 AC141846.1-201ENST00000568348 142 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 MIR548AD-201ENST00000584780 82 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 AC010205.1-201ENST00000616668 449 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 MIR3688-2-201ENST00000636963 87 ntBASIC-0.5□□□□□ -2.49
NKX6-2Q9C056 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 RNU6-899P-201ENST00000363947 107 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 SNORD61-201ENST00000384252 73 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 MIR548L-201ENST00000408303 86 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 AL160004.2-201ENST00000432935 350 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 SNORD77.4-201ENST00000516158 81 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.51□□□□□ -2.49
NKX6-2Q9C056 SNORA63.5-201ENST00000363548 123 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 RNA5SP245-201ENST00000364239 121 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 SNORD14C-201ENST00000365382 88 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 RNU6-46P-201ENST00000383860 107 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 RNU6-937P-201ENST00000384325 106 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 AC108059.2-201ENST00000434626 151 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 AC048344.4-201ENST00000619744 527 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 AC099654.14-201ENST00000638599 341 ntBASIC-0.52□□□□□ -2.49
NKX6-2Q9C056 MIR302B-201ENST00000362188 73 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 SNORD24-201ENST00000383884 75 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 AF228730.3-201ENST00000436691 102 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 SNORD126-201ENST00000459475 77 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 RNU6-180P-201ENST00000516697 61 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 AC100767.1-201ENST00000528178 123 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 AP003072.1-201ENST00000531740 145 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 MIR4662B-201ENST00000579498 81 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 MIR3925-201ENST00000584674 77 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 VN1R91P-201ENST00000594377 169 ntBASIC-0.53□□□□□ -2.49
NKX6-2Q9C056 MIR367-201ENST00000362299 68 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 RNU6-888P-201ENST00000363010 101 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 RNY3-201ENST00000365484 102 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 RNU6-763P-201ENST00000390865 106 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 RNU7-30P-201ENST00000516835 62 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 AC024909.2-201ENST00000553035 286 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 MIR4645-201ENST00000583158 77 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 MIR4677-201ENST00000584153 80 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 AC006157.1-201ENST00000611750 366 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 AL596211.1-201ENST00000569873 2277 ntBASIC-0.54□□□□□ -2.5
NKX6-2Q9C056 SNORD115-24-201ENST00000363528 82 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 RNU6-726P-201ENST00000364680 107 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 RNU6-144P-201ENST00000383951 107 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 RNA5SP127-201ENST00000411051 133 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 IGLVI-20-201ENST00000519296 130 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 AC011921.3-201ENST00000605540 361 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 MIR3666-201ENST00000607845 111 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 U7.6-201ENST00000610841 64 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 AL162376.1-201ENST00000624117 175 ntBASIC-0.55□□□□□ -2.5
NKX6-2Q9C056 SNORD49B-201ENST00000365172 72 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 RNU6-949P-201ENST00000384040 107 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 SNORA75.1-201ENST00000391130 148 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 RNA5SP261-201ENST00000410536 106 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 AC099799.1-201ENST00000439809 192 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 RNU6-191P-201ENST00000516295 94 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 RNU6-365P-201ENST00000517113 106 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 DEFB131E-201ENST00000532329 154 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 MIR5706-201ENST00000579841 80 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 MIR378D2-201ENST00000580636 98 ntBASIC-0.56□□□□□ -2.5
NKX6-2Q9C056 SNORD114-28-201ENST00000363610 72 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 SNORA22B-201ENST00000383876 138 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 MIR559-201ENST00000385188 96 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 RNA5SP300-201ENST00000391197 107 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 RPL21P38-201ENST00000418090 167 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 MTND1P14-201ENST00000427400 950 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 AC026407.1-201ENST00000518369 204 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 AC138749.4-201ENST00000563970 127 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 MIR5690-201ENST00000583739 73 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 MIR4272-201ENST00000635924 64 ntBASIC-0.57□□□□□ -2.5
NKX6-2Q9C056 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.58□□□□□ -2.5
NKX6-2Q9C056 MIR196A2-201ENST00000385189 110 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms