Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SNX2P2-201ENST00000424553 323 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 AC245517.4-201ENST00000448601 281 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 RNU7-41P-201ENST00000515917 61 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 Y_RNA.686-201ENST00000516548 134 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 AC131055.1-201ENST00000584626 316 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 AL512598.1-201ENST00000610158 273 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 AL096861.1-201ENST00000610899 123 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
VPS50Q96JG6 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 Y_RNA.584-201ENST00000391090 114 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 snoU13.25-201ENST00000458945 104 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 RNA5SP445-201ENST00000515889 115 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 RNU2-13P-201ENST00000515909 113 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 RNU6-947P-201ENST00000516264 106 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 MIR3192-201ENST00000584920 77 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
VPS50Q96JG6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS50Q96JG6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VPS50Q96JG6 MIR342-201ENST00000362212 99 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-34-201ENST00000362441 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-12-201ENST00000362583 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-29-201ENST00000362834 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-9-201ENST00000362912 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-21-201ENST00000362963 81 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-14-201ENST00000363090 81 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-13-201ENST00000363358 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-41-201ENST00000363608 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-11-201ENST00000363616 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-5-201ENST00000363633 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-39-201ENST00000363694 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-4-201ENST00000363810 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-16-201ENST00000363887 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-6-201ENST00000363942 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-42-201ENST00000364273 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-15-201ENST00000364809 81 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-1-201ENST00000364961 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-26-201ENST00000365067 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-10-201ENST00000365073 81 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-43-201ENST00000365503 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-36-201ENST00000365629 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 AL603908.1-201ENST00000406098 201 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 AC108667.1-201ENST00000428618 249 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORA31.4-201ENST00000516049 129 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD111.1-201ENST00000516421 86 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORD115-40-201ENST00000606510 82 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 MIR4791-201ENST00000607666 84 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.53□□□□□ -2.16
VPS50Q96JG6 SNORA1.2-201ENST00000365189 134 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 Y_RNA.351-201ENST00000365436 96 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 Y_RNA.420-201ENST00000384043 110 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS50Q96JG6 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 RNU7-43P-201ENST00000516554 64 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 RNU6-165P-201ENST00000517170 99 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 AL512310.8-201ENST00000550183 120 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS50Q96JG6 MIR3664-201ENST00000579074 99 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.52□□□□□ -2.17
VPS50Q96JG6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS50Q96JG6 Y_RNA.568-201ENST00000384742 113 ntBASIC1.51□□□□□ -2.17
VPS50Q96JG6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS50Q96JG6 RPS29P24-201ENST00000486345 171 ntBASIC1.51□□□□□ -2.17
VPS50Q96JG6 RNA5SP236-201ENST00000516169 116 ntBASIC1.51□□□□□ -2.17
VPS50Q96JG6 RNU6-958P-201ENST00000516995 106 ntBASIC1.51□□□□□ -2.17
VPS50Q96JG6 snoU13.31-201ENST00000607291 104 ntBASIC1.51□□□□□ -2.17
VPS50Q96JG6 AC243994.1-201ENST00000618627 109 ntBASIC1.51□□□□□ -2.17
VPS50Q96JG6 AC008133.2-201ENST00000624540 351 ntBASIC1.51□□□□□ -2.17
VPS50Q96JG6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS50Q96JG6 MIR337-201ENST00000362281 93 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 SNORD33-201ENST00000362761 85 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 RNU6-309P-201ENST00000364573 106 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 RNU7-67P-201ENST00000459003 62 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 MIR4498-201ENST00000577599 66 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 HSPE1P19-201ENST00000603327 295 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
VPS50Q96JG6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS50Q96JG6 AC010332.2-201ENST00000613083 1904 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 RNU6-915P-201ENST00000364943 103 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 Y_RNA.343-201ENST00000365354 112 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 RNU6-257P-201ENST00000410238 98 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 AC009474.2-201ENST00000451383 136 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 RNU7-45P-201ENST00000459460 63 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 AC107297.1-201ENST00000459991 176 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 RNU6-998P-201ENST00000515894 101 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 AL121890.5-201ENST00000620848 304 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 AC091932.4-201ENST00000623386 200 ntBASIC1.49□□□□□ -2.17
VPS50Q96JG6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS50Q96JG6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 241.7 ms