Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 MTND4LP30-201ENST00000454092 297 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 snoU13.16-201ENST00000459350 104 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 SERF1AP1-201ENST00000514575 187 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 RNU6-1143P-201ENST00000516125 104 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 RNU6-1338P-201ENST00000516328 91 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 SNORA18.4-201ENST00000516440 124 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 AC006006.1-201ENST00000603082 144 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 AL136317.1-201ENST00000612653 226 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.802-201ENST00000614892 130 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.33□□□□□ -2.36
TNFRSF9Q07011 MIR924-201ENST00000638017 53 ntBASIC0.33□□□□□ -2.36
TNFRSF9Q07011 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
TNFRSF9Q07011 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-34-201ENST00000362441 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-12-201ENST00000362583 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.37-201ENST00000362606 108 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-29-201ENST00000362834 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-9-201ENST00000362912 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-21-201ENST00000362963 81 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-14-201ENST00000363090 81 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-13-201ENST00000363358 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.152-201ENST00000363578 100 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-41-201ENST00000363608 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-11-201ENST00000363616 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-5-201ENST00000363633 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-39-201ENST00000363694 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD18A-201ENST00000363753 72 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-4-201ENST00000363810 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-16-201ENST00000363887 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-6-201ENST00000363942 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.202-201ENST00000364083 110 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-42-201ENST00000364273 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-15-201ENST00000364809 81 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-1-201ENST00000364961 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-26-201ENST00000365067 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-10-201ENST00000365073 81 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-43-201ENST00000365503 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-36-201ENST00000365629 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.376-201ENST00000365638 108 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TNFRSF9Q07011 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 RNU6-1289P-201ENST00000384431 106 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 MIR626-201ENST00000385032 94 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORA40.5-201ENST00000391061 128 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.604-201ENST00000410574 102 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 RNU6-1203P-201ENST00000410703 110 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 RNA5SP222-201ENST00000411039 105 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 RNU6-651P-201ENST00000411040 105 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 MTCYBP6-201ENST00000441810 138 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 AL731563.1-201ENST00000442202 214 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD36C-201ENST00000516733 66 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 RNU6-1153P-201ENST00000516760 105 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.701-201ENST00000516812 110 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 RNU6-570P-201ENST00000517051 105 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 RNU6-1270P-201ENST00000517128 108 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 AC100767.1-201ENST00000528178 123 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 AP000753.3-201ENST00000604083 169 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 AP000942.4-201ENST00000604811 241 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 AC020891.4-201ENST00000605745 93 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 SNORD115-40-201ENST00000606510 82 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 AC134878.1-201ENST00000619901 243 ntBASIC0.32□□□□□ -2.36
TNFRSF9Q07011 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
TNFRSF9Q07011 MIR377-201ENST00000362145 69 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 RNU6-797P-201ENST00000363101 109 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.229-201ENST00000364347 113 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 SNORA27-201ENST00000384323 126 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.512-201ENST00000384518 102 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 SNORA8.3-201ENST00000384679 139 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 MT-TT-201ENST00000387460 66 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 HMGN1P33-201ENST00000432945 451 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 AF228730.3-201ENST00000436691 102 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 AC087499.4-201ENST00000448505 178 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 RNU6-365P-201ENST00000517113 106 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 MIR4771-2-201ENST00000577758 74 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 MIR4662B-201ENST00000579498 81 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 MIR5688-201ENST00000580619 83 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 MIR4771-1-201ENST00000582617 74 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 MIR4264-201ENST00000583520 66 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 AL356055.1-201ENST00000602528 446 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 uc_338.6-201ENST00000613544 171 ntBASIC0.31□□□□□ -2.36
TNFRSF9Q07011 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.31□□□□□ -2.36
TNFRSF9Q07011 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.258-201ENST00000364613 105 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.275-201ENST00000364726 110 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 RNU6-740P-201ENST00000364734 105 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 SNORA33.2-201ENST00000365413 134 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 RNU6-945P-201ENST00000383947 107 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 SNORA36.2-201ENST00000384004 127 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 SNORD38B-201ENST00000384690 67 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 MIR520F-201ENST00000384824 87 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 AL138752.1-201ENST00000452964 351 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.3□□□□□ -2.36
TNFRSF9Q07011 SNRPGP8-201ENST00000454064 226 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 RNU7-62P-201ENST00000458856 62 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 RNU6-977P-201ENST00000516411 103 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 RNU6-453P-201ENST00000516819 85 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 AP001282.2-201ENST00000616149 309 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms