Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.49□□□□□ -2.49
ABCA4P78363 AL593851.1-201ENST00000426171 157 ntBASIC-0.49□□□□□ -2.49
ABCA4P78363 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.49□□□□□ -2.49
ABCA4P78363 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.49□□□□□ -2.49
ABCA4P78363 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.49□□□□□ -2.49
ABCA4P78363 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.49□□□□□ -2.49
ABCA4P78363 MIR548H5-201ENST00000580314 60 ntBASIC-0.49□□□□□ -2.49
ABCA4P78363 MIR5692C1-201ENST00000585309 91 ntBASIC-0.49□□□□□ -2.49
ABCA4P78363 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.49□□□□□ -2.49
ABCA4P78363 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 RNU6-809P-201ENST00000384461 107 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AL353813.1-201ENST00000440700 253 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.5□□□□□ -2.49
ABCA4P78363 RNU6-983P-201ENST00000516004 103 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 SNORA18.6-201ENST00000516792 115 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AC022616.4-201ENST00000522985 181 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AC138749.4-201ENST00000563970 127 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.5□□□□□ -2.49
ABCA4P78363 AC124312.5-201ENST00000604451 268 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AP003357.1-201ENST00000604497 148 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AC011373.1-201ENST00000607270 237 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AC145423.2-201ENST00000610631 239 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AC084782.3-201ENST00000612282 578 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AC079248.2-201ENST00000623779 326 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.5□□□□□ -2.49
ABCA4P78363 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 RNU6-154P-201ENST00000384306 106 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 RNY3P9-201ENST00000384727 106 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 MIR521-1-201ENST00000384902 87 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 MTND3P1-201ENST00000441336 220 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 AL353691.2-201ENST00000443795 59 ntBASIC-0.5□□□□□ -2.49
ABCA4P78363 RNU6-208P-201ENST00000362431 107 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 SNORD115-25-201ENST00000362619 82 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 SNORA2.1-201ENST00000363089 137 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 RNU6-774P-201ENST00000363238 107 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 SNORD114-29-201ENST00000364819 70 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 SNORD50B-201ENST00000364995 70 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 RNU6-136P-201ENST00000384663 107 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 MIR29B1-201ENST00000385015 81 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 MIR527-201ENST00000385244 85 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 MIR548K-201ENST00000408406 116 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 RNU6-370P-201ENST00000411008 104 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 MTND1P27-201ENST00000451117 902 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 SCARNA18B-201ENST00000458806 135 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 AC011352.1-201ENST00000512300 793 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 RNU2-69P-201ENST00000516061 100 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 RNU6-720P-201ENST00000516363 108 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 SNORA40.17-201ENST00000517256 115 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 AC134698.4-201ENST00000523451 826 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.51□□□□□ -2.49
ABCA4P78363 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.51□□□□□ -2.49
ABCA4P78363 AC120024.2-201ENST00000576526 175 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 MIR3684-201ENST00000579779 74 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 AC005771.1-201ENST00000585581 349 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 uc_338.19-201ENST00000616808 99 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 AL445584.3-201ENST00000617173 78 ntBASIC-0.51□□□□□ -2.49
ABCA4P78363 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU6-818P-201ENST00000364837 108 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 MIR652-201ENST00000385278 98 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 MIR190B-201ENST00000401119 79 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 MIR548I2-201ENST00000408348 149 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 FCF1P4-201ENST00000448326 183 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.52□□□□□ -2.49
ABCA4P78363 AC108019.1-201ENST00000512540 175 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 SNORA27.4-201ENST00000516650 95 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU6-531P-201ENST00000516694 104 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 MIR4756-201ENST00000577874 78 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 MIR4676-201ENST00000583078 72 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.52□□□□□ -2.49
ABCA4P78363 MIR4424-201ENST00000585257 86 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 AC006386.1-201ENST00000619436 415 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 SNORD14E-201ENST00000364009 85 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU6-652P-201ENST00000365488 107 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU6-746P-201ENST00000384112 109 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU6-517P-201ENST00000384362 110 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 MIR519E-201ENST00000385075 84 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU6-913P-201ENST00000390913 95 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU2-61P-201ENST00000411069 191 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 AL035461.1-201ENST00000421490 332 ntBASIC-0.52□□□□□ -2.49
ABCA4P78363 HSPE1P25-201ENST00000455484 251 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms